RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TMEM14AQ9Y6G1 99 aa11.76□□□□□ -0.53
SEC13-206ENST00000397102 IGKV1-27A0A075B6S5 117 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 A0A087X0M5 115 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 A0A1B0GX30 115 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 HMGN1P05114 100 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 TMEM11P17152 192 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 RBM39Q14498 530 aaKnown RBP11.75□□□□□ -0.53
SEC13-206ENST00000397102 GINS1Q14691 196 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 ZNF146Q15072 292 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 BCL2L15Q5TBC7 163 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 LCNL1Q6ZST4 164 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 SLC25A26Q70HW3 274 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 PGAM4Q8N0Y7 254 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 OR56B4Q8NH76 319 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 TOMM40LQ969M1 308 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 RPEQ96AT9 228 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 CITED4Q96RK1 184 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 FEVQ99581 238 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 TTTY10Q9BZA0 68 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 CCDC134Q9H6E4 229 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 COPS3Q9UNS2 423 aa11.75□□□□□ -0.53
SEC13-206ENST00000397102 SIRT4Q9Y6E7 314 aaPredicted RBP11.75□□□□□ -0.53
SEC13-206ENST00000397102 FUOMA2VDF0 154 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 LY86O95711 162 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 RPLP1P05386 114 aaKnown RBP11.74□□□□□ -0.53
SEC13-206ENST00000397102 MRPL3P09001 348 aaKnown RBP11.74□□□□□ -0.53
SEC13-206ENST00000397102 DUSP1P28562 367 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 CDX1P47902 265 aaPredicted RBP11.74□□□□□ -0.53
SEC13-206ENST00000397102 FUT6P51993 359 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 CDC42P60953 191 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 APOFQ13790 326 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 HES1Q14469 280 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 KPNB1Q14974 876 aaKnown RBP11.74□□□□□ -0.53
SEC13-206ENST00000397102 UBE2V2Q15819 145 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 PNLIPRP3Q17RR3 467 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 ZNF260Q3ZCT1 412 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 SPIN3Q5JUX0 258 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 ZFAND6Q6FIF0 208 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 CYP2R1Q6VVX0 501 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 MEPCEQ7L2J0 689 aaKnown RBP11.74□□□□□ -0.53
SEC13-206ENST00000397102 DRAM1Q8N682 238 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 OR4D6Q8NGJ1 314 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 MAGIXQ9H6Y5 334 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 PLEKHA1Q9HB21 404 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 RBFOX1Q9NWB1 397 aaKnown RBP11.74□□□□□ -0.53
SEC13-206ENST00000397102 NKX1-2Q9UD57 310 aaPredicted RBP11.74□□□□□ -0.53
SEC13-206ENST00000397102 OR52A1Q9UKL2 312 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 R4GMQ9 66 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 SORL1Q92673 2214 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 STARD9Q9P2P6 4700 aa11.74□□□□□ -0.53
SEC13-206ENST00000397102 TRBV2A0A0J9YWF9 115 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 ENTPD6O75354 484 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 GATBO75879 557 aaKnown RBP11.73□□□□□ -0.53
SEC13-206ENST00000397102 ATP6V1B2P21281 511 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 CCL1P22362 96 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 PTGFRP43088 359 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 INSL3P51460 131 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 GK3PQ14409 553 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 CXorf66Q5JRM2 361 aaPredicted RBP11.73□□□□□ -0.53
SEC13-206ENST00000397102 FAM58AQ8N1B3 248 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 OR9G1Q8NH87 305 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 GIPC3Q8TF64 312 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 BORCS8Q96FH0 119 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 GON7Q9BXV9 100 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 ZMAT4Q9H898 229 aa11.73□□□□□ -0.53
SEC13-206ENST00000397102 AMMECR1Q9Y4X0 333 aaPredicted RBP11.73□□□□□ -0.53
SEC13-206ENST00000397102 A0A1W2PPI3 338 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 TCRBV5S2A0A599 114 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 CCDC182A6NF36 153 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 AP4M1O00189 453 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 SIRPB1O00241 398 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 CCRL2O00421 344 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 GLIPR1P48060 266 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 NPBWR2P48146 333 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 ACTR3P61158 418 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 CDK5Q00535 292 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 FHL3Q13643 280 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 SPATS1Q496A3 300 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 UTF1Q5T230 341 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 RNF152Q8N8N0 203 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 HRASLS5Q96KN8 279 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 APOL4Q9BPW4 351 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 KRTAP17-1Q9BYP8 105 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 CHST5Q9GZS9 411 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 ACTR3BQ9P1U1 418 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 SNX5Q9Y5X3 404 aa11.72□□□□□ -0.53
SEC13-206ENST00000397102 ODAMA1E959 279 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 LINC01548A6NM66 108 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 ZNF729A6NN14 1252 aaPredicted RBP11.71□□□□□ -0.53
SEC13-206ENST00000397102 OR2H2O95918 312 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 CYB5AP00167 134 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 ELANEP08246 267 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 PRKACAP17612 351 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 BCL3P20749 454 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 SNU13P55769 128 aaKnown RBP11.71□□□□□ -0.53
SEC13-206ENST00000397102 AESQ08117 197 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 FOXE3Q13461 319 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 GPR50Q13585 617 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 HNF4GQ14541 408 aa11.71□□□□□ -0.53
SEC13-206ENST00000397102 ZNF322Q6U7Q0 402 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms