RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 POLR2AP24928 1970 aaKnown RBP12.44□□□□□ -0.42
COL4A3-202ENST00000396578 LINC01553A4QN01 128 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 ETFBKMTQ8IXQ9 262 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 BVESQ8NE79 360 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 OR13G1Q8NGZ3 307 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 K7ERU9 68 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 DEFB109BQ30KR1 87 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 SEZ6L2Q6UXD5 910 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 LINC00052Q96N35 136 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 ZNF256Q9Y2P7 627 aaPredicted RBP12.44□□□□□ -0.42
COL4A3-202ENST00000396578 GABRA1P14867 456 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 ZNF788Q6ZQV5 615 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 OR4S2Q8NH73 311 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 LOXL2Q9Y4K0 774 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 FAM74A7A6NL05 159 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 OR5B21A6NL26 309 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 RPS4Y2Q8TD47 263 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 ADAT3Q96EY9 351 aaPredicted RBP12.44□□□□□ -0.42
COL4A3-202ENST00000396578 CNRIP1Q96F85 164 aaPredicted RBP12.44□□□□□ -0.42
COL4A3-202ENST00000396578 CNTD2Q9H8S5 307 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 PITPNC1Q9UKF7 332 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 PPIL1Q9Y3C6 166 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 TRGV8A0A0C4DH27 118 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 ANKRD20A5PA0PJZ0 165 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 PDCD1Q15116 288 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 ISOC2Q96AB3 205 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 MTCH2Q9Y6C9 303 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 ANKRD55Q3KP44 614 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 TBC1D26Q86UD7 250 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 MCHR2Q969V1 340 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 MOGAT1Q96PD6 335 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 FUT9Q9Y231 359 aa12.44□□□□□ -0.42
COL4A3-202ENST00000396578 F5P12259 2224 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 GSTZ1O43708 216 aaPredicted RBP12.43□□□□□ -0.42
COL4A3-202ENST00000396578 TNFSF15O95150 251 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 COL8A1P27658 744 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 KHDC3LQ587J8 217 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 STPG2Q8N412 459 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 OR2D3Q8NGH3 330 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 MMP25Q9NPA2 562 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 OR6C3Q9NZP0 311 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 MMP17Q9ULZ9 603 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 MFSD2BA6NFX1 497 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 PDCD6O75340 191 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 MNX1P50219 401 aaPredicted RBP12.43□□□□□ -0.42
COL4A3-202ENST00000396578 SFTPA2Q8IWL1 248 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 SFTPA1Q8IWL2 248 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 OR5R1Q8NH85 324 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 VN1R17PQ8TDU5 208 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 FBXO17Q96EF6 278 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 TMEFF2Q9UIK5 374 aaPredicted RBP12.43□□□□□ -0.42
COL4A3-202ENST00000396578 HMGA1P17096 107 aaKnown RBP12.43□□□□□ -0.42
COL4A3-202ENST00000396578 LGALS7P47929 136 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 CEBPDP49716 269 aaPredicted RBP12.43□□□□□ -0.42
COL4A3-202ENST00000396578 CLDN18P56856 261 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 INSL4Q14641 139 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 FBXL6Q8N531 539 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 FZR1Q9UM11 496 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 ARAP2Q8WZ64 1704 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 TMEM218A2RU14 115 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 TM4SF4P48230 202 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 LSMEM1Q8N8F7 131 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 TMEM238LA0A1B0GVL6 79 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 A6NJY4 79 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 CRYABP02511 175 aaKnown RBP12.43□□□□□ -0.42
COL4A3-202ENST00000396578 SLC35E3Q7Z769 313 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 TRGV5A0A0B4J1U4 118 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 PRRT4C9JH25 899 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 MKRN2OSH3BPM6 223 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.43□□□□□ -0.42
COL4A3-202ENST00000396578 CCL4L1Q8NHW4 92 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 CLEC1BQ9P126 229 aa12.43□□□□□ -0.42
COL4A3-202ENST00000396578 RER1O15258 196 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 HAND1O96004 215 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 MPV17LQ2QL34 196 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 DEGS2Q6QHC5 323 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 GFRALQ6UXV0 394 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 PRDM7Q9NQW5 492 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 IL17BQ9UHF5 180 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 TRDCB7Z8K6 153 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 CEACAM3P40198 252 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 MRGPRX1Q96LB2 322 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 CXCL16Q9H2A7 254 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 hADV38S2A0JD32 116 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 SMPD2O60906 423 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 IGLV3-27P01718 113 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 TCL1AP56279 114 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 OR4A47Q6IF82 309 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 OR5M9Q8NGP3 310 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 ADTRPQ96IZ2 230 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 ZNF275Q9NSD4 429 aaPredicted RBP12.42□□□□□ -0.42
COL4A3-202ENST00000396578 K7EQS6 105 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 CTDSPLO15194 276 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 PPIHO43447 177 aaKnown RBP12.42□□□□□ -0.42
COL4A3-202ENST00000396578 ACTL6AO96019 429 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 ZNF683Q8IZ20 524 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 TCF21O43680 179 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 TCTN1Q2MV58 587 aa12.42□□□□□ -0.42
COL4A3-202ENST00000396578 COL5A1-AS1Q5SY13 56 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms