RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 NQO2P16083 231 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 CDX1P47902 265 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-205ENST00000394768 SPANXN1Q5VSR9 72 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 FAM74A7A6NL05 159 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 ZNF737O75373 536 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 ZXDAP98168 799 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 ALKBH6Q3KRA9 238 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 OR10D3Q8NH80 312 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 MRPL30Q8TCC3 161 aaKnown RBP6.63□□□□□ -1.35
SYNE2-205ENST00000394768 IL22RA2Q969J5 263 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 GPX7Q96SL4 187 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-205ENST00000394768 TMEM70Q9BUB7 260 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 CEP250Q9BV73 2442 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 MAP1LC3B2A6NCE7 125 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 TMEM202A6NGA9 273 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 PF4V1P10720 104 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 TM4SF20Q53R12 229 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 MAP1LC3BQ9GZQ8 125 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 AHDC1Q5TGY3 1603 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-205ENST00000394768 RHBDL1O75783 438 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 AVPR2P30518 371 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 FOXF1Q12946 379 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 IL24Q13007 206 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 KISS1Q15726 138 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 SMN1Q16637 294 aaKnown RBP6.63□□□□□ -1.35
SYNE2-205ENST00000394768 PDZD11Q5EBL8 140 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 C10orf113Q5VZT2 155 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 ZNF66Q6ZN08 573 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 ALKBH7Q9BT30 221 aaPredicted RBP6.63□□□□□ -1.35
SYNE2-205ENST00000394768 ANGPTL4Q9BY76 406 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 MED29Q9NX70 200 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 ZAR1LA6NP61 321 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 CD96P40200 585 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 CD81P60033 236 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 ZG16BQ96DA0 208 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 SPNS1Q9H2V7 528 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 CACNG5Q9UF02 275 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 SF3B6Q9Y3B4 125 aaKnown RBP6.63□□□□□ -1.35
SYNE2-205ENST00000394768 SCN1AP35498 2009 aa6.63□□□□□ -1.35
SYNE2-205ENST00000394768 ANKRD36A6QL64 1941 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 CA6P23280 308 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 GPNMBQ14956 572 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 GABRA6Q16445 453 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 TMEM78Q5T7P6 136 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 FAM53AQ6NSI3 398 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-205ENST00000394768 PRELID3AQ96N28 172 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 TRAPPC4Q9Y296 219 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 TUBGCP6Q96RT7 1819 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 TRBV23-1A0A0A0MS06 115 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 C3orf85A0A1B0GTC6 90 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 TRDCB7Z8K6 153 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 CXorf1O96002 111 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 DLK2Q6UY11 383 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 OR2T10Q8NGZ9 312 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 GMPPAQ96IJ6 420 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-205ENST00000394768 IL21Q9HBE4 155 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 CKAP5Q14008 2032 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 SPTBN2O15020 2390 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 KIF26BQ2KJY2 2108 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 SIGLEC1Q9BZZ2 1709 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 K7ESM1 405 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 RGS13O14921 159 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 CDC14BO60729 498 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 TMEM30BQ3MIR4 351 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 NUDT10Q8NFP7 164 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 GALNT14Q96FL9 552 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 AUP1Q9Y679 476 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 WSB1Q9Y6I7 421 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 TRIOBPQ9H2D6 2365 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 PPP1R17O96001 155 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 GABRB1P18505 474 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 CLDN20P56880 219 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 MTURNQ8N3F0 131 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 OR4A5Q8NH83 315 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 SIGLEC11Q96RL6 698 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 RNF7Q9UBF6 113 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 MIOXQ9UGB7 285 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 NAT8Q9UHE5 227 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 RAG2P55895 527 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 PMP22Q01453 160 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 INO80CQ6PI98 192 aaPredicted RBP6.62□□□□□ -1.35
SYNE2-205ENST00000394768 B3GNT9Q6UX72 402 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 LIAT1Q6ZQX7 453 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 FUNDC1Q8IVP5 155 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 TMEM183AQ8IXX5 376 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 SMPD2O60906 423 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 SFTA3P0C7M3 94 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 SLC6A12P48065 614 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 C6orf201Q7Z4U5 140 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 LRP12Q9Y561 859 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 KCNE1BA0A087WTH5 132 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 C16orf97H3BN30 126 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 SNRPD3P62318 126 aaKnown RBP6.62□□□□□ -1.35
SYNE2-205ENST00000394768 OR5C1Q8NGR4 320 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 MS4A4AQ96JQ5 239 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 MDC1Q14676 2089 aaKnown RBP6.62□□□□□ -1.35
SYNE2-205ENST00000394768 EPPINO95925 133 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 CD1BP29016 333 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 MC5RP33032 325 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 RPS20P60866 119 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms