RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 RAB1AP62820 205 aa12.67□□□□□ -0.38
CDH16-202ENST00000394055 CYCSP99999 105 aaKnown RBP12.67□□□□□ -0.38
CDH16-202ENST00000394055 RAB32Q13637 225 aa12.67□□□□□ -0.38
CDH16-202ENST00000394055 ELP2Q6IA86 826 aa12.67□□□□□ -0.38
CDH16-202ENST00000394055 TMEM88Q6PEY1 159 aa12.67□□□□□ -0.38
CDH16-202ENST00000394055 RBMS3Q6XE24 437 aaKnown RBP12.67□□□□□ -0.38
CDH16-202ENST00000394055 EIF4E3Q8N5X7 224 aaKnown RBP12.67□□□□□ -0.38
CDH16-202ENST00000394055 MDS2Q8NDY4 140 aa12.67□□□□□ -0.38
CDH16-202ENST00000394055 PXT1Q8NFP0 134 aa12.67□□□□□ -0.38
CDH16-202ENST00000394055 SPSB4Q96A44 273 aa12.67□□□□□ -0.38
CDH16-202ENST00000394055 FER1L6-AS2Q96M78 137 aa12.67□□□□□ -0.38
CDH16-202ENST00000394055 RASL12Q9NYN1 266 aa12.67□□□□□ -0.38
CDH16-202ENST00000394055 SHPKQ9UHJ6 478 aa12.67□□□□□ -0.38
CDH16-202ENST00000394055 KLF13Q9Y2Y9 288 aaPredicted RBP12.67□□□□□ -0.38
CDH16-202ENST00000394055 SPP1P10451 314 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 GPM6AP51674 278 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 COLCA1Q6ZS62 124 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 MRPL21Q7Z2W9 205 aaKnown RBP12.66□□□□□ -0.38
CDH16-202ENST00000394055 SLAMF9Q96A28 289 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 FGF23Q9GZV9 251 aaPredicted RBP12.66□□□□□ -0.38
CDH16-202ENST00000394055 ZNF442Q9H7R0 627 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 IFNA2P01563 188 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 RBMXP38159 391 aaKnown RBP12.66□□□□□ -0.38
CDH16-202ENST00000394055 PRDX4Q13162 271 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 SP6Q3SY56 376 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 HIKESHIQ53FT3 197 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 RNFT1Q5M7Z0 435 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 STARD10Q9Y365 291 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 KLRC4-KLRK1H3BQV0 150 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 RRP8O43159 456 aaKnown RBP12.66□□□□□ -0.38
CDH16-202ENST00000394055 RBM11P57052 281 aaKnown RBP12.66□□□□□ -0.38
CDH16-202ENST00000394055 SLC10A1Q14973 349 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 SURF2Q15527 256 aaPredicted RBP12.66□□□□□ -0.38
CDH16-202ENST00000394055 NRN1LQ496H8 165 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 Q6ZPA2 131 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 C5orf24Q7Z6I8 188 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 ZFP82Q8N141 532 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 HS3ST6Q96QI5 342 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 SPOCK3Q9BQ16 436 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 SLC25A32Q9H2D1 315 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 NECAP2Q9NVZ3 263 aa12.66□□□□□ -0.38
CDH16-202ENST00000394055 SHANK1Q9Y566 2161 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 ASPMQ8IZT6 3477 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 F8VVB4 439 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 F8VWA3 439 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 RPL36A-HNRNPH2H7BZ11 118 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 BCL3P20749 454 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 ARG2P78540 354 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 PMP22Q01453 160 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 MALLQ13021 153 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 SRSF6Q13247 344 aaKnown RBP12.65□□□□□ -0.38
CDH16-202ENST00000394055 TRIP6Q15654 476 aaKnown RBP12.65□□□□□ -0.38
CDH16-202ENST00000394055 ALKBH2Q6NS38 261 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 TMEM200AQ86VY9 491 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 SGPP2Q8IWX5 399 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 REPIN1Q9BWE0 567 aaKnown RBP12.65□□□□□ -0.38
CDH16-202ENST00000394055 IL36RNQ9UBH0 155 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 C3orf80F5H4A9 247 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 HSPB6O14558 160 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 PDCD6O75340 191 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 PIGPP57054 158 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 SNTB1Q13884 538 aaKnown RBP12.65□□□□□ -0.38
CDH16-202ENST00000394055 DAZAP2Q15038 168 aaPredicted RBP12.65□□□□□ -0.38
CDH16-202ENST00000394055 PHLDA2Q53GA4 152 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 POC1AQ8NBT0 407 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 GLYATL2Q8WU03 294 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 HPSE2Q8WWQ2 592 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 C2orf50Q96LR7 162 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 UFSP2Q9NUQ7 469 aa12.65□□□□□ -0.38
CDH16-202ENST00000394055 CTSDP07339 412 aaPredicted RBP12.64□□□□□ -0.39
CDH16-202ENST00000394055 CD46P15529 392 aa12.64□□□□□ -0.39
CDH16-202ENST00000394055 DTYMKP23919 212 aa12.64□□□□□ -0.39
CDH16-202ENST00000394055 FCGR2CP31995 323 aa12.64□□□□□ -0.39
CDH16-202ENST00000394055 RBM39Q14498 530 aaKnown RBP12.64□□□□□ -0.39
CDH16-202ENST00000394055 GTF3AQ92664 365 aaKnown RBP12.64□□□□□ -0.39
CDH16-202ENST00000394055 PIK3IP1Q96FE7 263 aa12.64□□□□□ -0.39
CDH16-202ENST00000394055 SPRR3Q9UBC9 169 aa12.64□□□□□ -0.39
CDH16-202ENST00000394055 ZNF724A8MTY0 619 aa12.64□□□□□ -0.39
CDH16-202ENST00000394055 ZNF728P0DKX0 622 aa12.64□□□□□ -0.39
CDH16-202ENST00000394055 DUSP1P28562 367 aa12.64□□□□□ -0.39
CDH16-202ENST00000394055 IGFBP7Q16270 282 aa12.64□□□□□ -0.39
CDH16-202ENST00000394055 IAH1Q2TAA2 248 aaPredicted RBP12.64□□□□□ -0.39
CDH16-202ENST00000394055 ZNF552Q9H707 407 aaPredicted RBP12.64□□□□□ -0.39
CDH16-202ENST00000394055 IL36GQ9NZH8 169 aa12.64□□□□□ -0.39
CDH16-202ENST00000394055 TRBV6-7A0A0A0MS04 114 aa12.63□□□□□ -0.39
CDH16-202ENST00000394055 LILRA1O75019 489 aa12.63□□□□□ -0.39
CDH16-202ENST00000394055 FBP1P09467 338 aa12.63□□□□□ -0.39
CDH16-202ENST00000394055 PRSS54Q6PEW0 395 aa12.63□□□□□ -0.39
CDH16-202ENST00000394055 MRPL24Q96A35 216 aaKnown RBP12.63□□□□□ -0.39
CDH16-202ENST00000394055 APOBEC3DQ96AK3 386 aaPredicted RBP12.63□□□□□ -0.39
CDH16-202ENST00000394055 IP6K3Q96PC2 410 aa12.63□□□□□ -0.39
CDH16-202ENST00000394055 C1orf123Q9NWV4 160 aa12.63□□□□□ -0.39
CDH16-202ENST00000394055 CRYM-AS1A6NIL9 109 aa12.63□□□□□ -0.39
CDH16-202ENST00000394055 ZNF732B4DXR9 585 aa12.63□□□□□ -0.39
CDH16-202ENST00000394055 GPX4P36969 197 aaPredicted RBP12.63□□□□□ -0.39
CDH16-202ENST00000394055 SNRPEP62304 92 aaKnown RBP12.63□□□□□ -0.39
CDH16-202ENST00000394055 RNPS1Q15287 305 aaKnown RBP12.63□□□□□ -0.39
CDH16-202ENST00000394055 ABCA11PQ4W5N1 156 aa12.63□□□□□ -0.39
CDH16-202ENST00000394055 ZNF766Q5HY98 468 aa12.63□□□□□ -0.39
CDH16-202ENST00000394055 ZDHHC23Q8IYP9 409 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms