RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 MOB3AQ96BX8 217 aa21.92■■□□□ 1.1
SMARCD3-203ENST00000392811 NAA60Q9H7X0 242 aa21.92■■□□□ 1.1
SMARCD3-203ENST00000392811 RCC2Q9P258 522 aaKnown RBP21.92■■□□□ 1.1
SMARCD3-203ENST00000392811 A0A1W2PR80 420 aa21.91■■□□□ 1.1
SMARCD3-203ENST00000392811 ZNF14P17017 642 aaPredicted RBP21.91■■□□□ 1.1
SMARCD3-203ENST00000392811 NUBP1P53384 320 aa21.91■■□□□ 1.1
SMARCD3-203ENST00000392811 MPV17LQ2QL34 196 aa21.91■■□□□ 1.1
SMARCD3-203ENST00000392811 RTN4IP1Q8WWV3 396 aaPredicted RBP21.91■■□□□ 1.1
SMARCD3-203ENST00000392811 MEMO1Q9Y316 297 aa21.91■■□□□ 1.1
SMARCD3-203ENST00000392811 URB1O60287 2271 aaKnown RBP21.91■■□□□ 1.1
SMARCD3-203ENST00000392811 TRAV17A0A0B4J275 112 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 MSGN1A6NI15 193 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 OR5B21A6NL26 309 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 IAH1Q2TAA2 248 aaPredicted RBP21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 IGF2-ASQ6U949 168 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 PTPRBP23467 1997 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 AADACP22760 399 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 CA6P23280 308 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 DUSP1P28562 367 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 S100A10P60903 97 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 GNG3P63215 75 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 SP6Q3SY56 376 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 PHLDA2Q53GA4 152 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 IGSF11Q5DX21 431 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 MRPL24Q96A35 216 aaKnown RBP21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 ZNF488Q96MN9 340 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 SLC2A9Q9NRM0 540 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 KCNIP3Q9Y2W7 256 aa21.9■■□□□ 1.1
SMARCD3-203ENST00000392811 TPD52L2O43399 206 aaKnown RBP21.89■■□□□ 1.1
SMARCD3-203ENST00000392811 CRYZL1O95825 349 aa21.89■■□□□ 1.1
SMARCD3-203ENST00000392811 NAPSAO96009 420 aa21.89■■□□□ 1.1
SMARCD3-203ENST00000392811 PRKACAP17612 351 aa21.89■■□□□ 1.1
SMARCD3-203ENST00000392811 UCP3P55916 312 aa21.89■■□□□ 1.1
SMARCD3-203ENST00000392811 TGFBR3Q03167 851 aa21.89■■□□□ 1.1
SMARCD3-203ENST00000392811 DEFB109BQ30KR1 87 aa21.89■■□□□ 1.1
SMARCD3-203ENST00000392811 Q6ZS49 121 aa21.89■■□□□ 1.1
SMARCD3-203ENST00000392811 FAM214BQ7L5A3 538 aa21.89■■□□□ 1.1
SMARCD3-203ENST00000392811 ZNF573Q86YE8 665 aa21.89■■□□□ 1.1
SMARCD3-203ENST00000392811 LYZL6O75951 148 aa21.89■■□□□ 1.09
SMARCD3-203ENST00000392811 OR5AC1P0C628 307 aa21.89■■□□□ 1.09
SMARCD3-203ENST00000392811 PET100P0DJ07 73 aa21.89■■□□□ 1.09
SMARCD3-203ENST00000392811 UBE2NP61088 152 aaKnown RBP21.89■■□□□ 1.09
SMARCD3-203ENST00000392811 SNTB1Q13884 538 aaKnown RBP21.89■■□□□ 1.09
SMARCD3-203ENST00000392811 TMEM187Q14656 261 aa21.89■■□□□ 1.09
SMARCD3-203ENST00000392811 GGNBP1Q5YKI7 109 aa21.89■■□□□ 1.09
SMARCD3-203ENST00000392811 SLC38A6Q8IZM9 456 aa21.89■■□□□ 1.09
SMARCD3-203ENST00000392811 GALNT14Q96FL9 552 aa21.89■■□□□ 1.09
SMARCD3-203ENST00000392811 Q9N2K0 584 aa21.89■■□□□ 1.09
SMARCD3-203ENST00000392811 HSPB6O14558 160 aa21.88■■□□□ 1.09
SMARCD3-203ENST00000392811 NUP62P37198 522 aaPredicted RBP21.88■■□□□ 1.09
SMARCD3-203ENST00000392811 HERV-K104P61576 105 aa21.88■■□□□ 1.09
SMARCD3-203ENST00000392811 GUSBP1Q15486 140 aa21.88■■□□□ 1.09
SMARCD3-203ENST00000392811 STOML3Q8TAV4 291 aa21.88■■□□□ 1.09
SMARCD3-203ENST00000392811 AQP10Q96PS8 301 aa21.88■■□□□ 1.09
SMARCD3-203ENST00000392811 CYTL1Q9NRR1 136 aa21.88■■□□□ 1.09
SMARCD3-203ENST00000392811 SESN1Q9Y6P5 492 aa21.88■■□□□ 1.09
SMARCD3-203ENST00000392811 AQP7O14520 342 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 IFNA21P01568 189 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 IDH3GP51553 393 aaPredicted RBP21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 IGFBP7Q16270 282 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 C5orf24Q7Z6I8 188 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 OR5T2Q8NGG2 359 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 OR11L1Q8NGX0 322 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 NARFLQ9H6Q4 476 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 FAM86C1Q9NVL1 165 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 A8MXK9 166 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 SMPD2O60906 423 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 PPYP01298 95 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 FGF2P09038 288 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 IL24Q13007 206 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 TSC22D1Q15714 1073 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 SRSF7Q16629 238 aaKnown RBP eCLIP21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 PAN3Q58A45 887 aaKnown RBP21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 FBXW12Q6X9E4 464 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 NEK7Q8TDX7 302 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 CCDC120Q96HB5 630 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 LINC00052Q96N35 136 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 RSRP1Q9BUV0 290 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 OR51I2Q9H344 312 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 PLK3Q9H4B4 646 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 PLSCR2Q9NRY7 297 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 LHX6Q9UPM6 363 aa21.87■■□□□ 1.09
SMARCD3-203ENST00000392811 SHANK1Q9Y566 2161 aa21.86■■□□□ 1.09
SMARCD3-203ENST00000392811 GABRA6Q16445 453 aa21.86■■□□□ 1.09
SMARCD3-203ENST00000392811 HSD17B13Q7Z5P4 300 aaPredicted RBP21.86■■□□□ 1.09
SMARCD3-203ENST00000392811 FOXRED2Q8IWF2 684 aa21.86■■□□□ 1.09
SMARCD3-203ENST00000392811 CNEP1R1Q8N9A8 125 aa21.86■■□□□ 1.09
SMARCD3-203ENST00000392811 SHARPINQ9H0F6 387 aa21.86■■□□□ 1.09
SMARCD3-203ENST00000392811 CDH20Q9HBT6 801 aa21.86■■□□□ 1.09
SMARCD3-203ENST00000392811 DNAJB11Q9UBS4 358 aa21.86■■□□□ 1.09
SMARCD3-203ENST00000392811 TUBD1Q9UJT1 453 aa21.86■■□□□ 1.09
SMARCD3-203ENST00000392811 C3orf80F5H4A9 247 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 J3QW42 95 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 SCO1O75880 301 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 ZP3P21754 424 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 PPP1CBP62140 327 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 TCF15Q12870 199 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 MRPL49Q13405 166 aaKnown RBP21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 Q6ZT83 130 aa21.85■■□□□ 1.09
SMARCD3-203ENST00000392811 CCDC36Q8IYA8 594 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms