RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 NSUN5P2Q63ZY6 315 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 THNSL2Q86YJ6 484 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 LGI3Q8N145 548 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 TCEAL7Q9BRU2 100 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 METTL9Q9H1A3 318 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 SMOC1Q9H4F8 434 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 UNKLQ9H9P5 680 aaKnown RBP12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 NECAP2Q9NVZ3 263 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 NUP210LQ5VU65 1888 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 AADACP22760 399 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 ELLP55199 621 aaPredicted RBP12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 MLF1P58340 268 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 EWSR1Q01844 656 aaKnown RBP eCLIP12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 SURF2Q15527 256 aaPredicted RBP12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 COL13A1Q5TAT6 717 aaPredicted RBP12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 HIST2H3PS2Q5TEC6 136 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 CYB5R2Q6BCY4 276 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 GUSBP11Q6P575 273 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 VASH2Q86V25 355 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 ST8SIA1Q92185 356 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 WSB1Q9Y6I7 421 aa12.66□□□□□ -0.38
LRRFIP1-204ENST00000392000 SERPINE3A8MV23 424 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 ADAM20O43506 726 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 TRAPPC6AO75865 159 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 IAPPP10997 89 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 TMEM267Q0VDI3 215 aaPredicted RBP12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 PLCXD3Q63HM9 321 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 SMRP1Q8NCR6 262 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 PLPP5Q8NEB5 264 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 Q8WTZ3 238 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 METTL1Q9UBP6 276 aaKnown RBP12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 USF3Q68DE3 2245 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 RBFOX3A6NFN3 312 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 HTR5AP47898 357 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 TESK1Q15569 626 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 IGFBP7Q16270 282 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 WDR25Q64LD2 544 aaPredicted RBP12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 SLC25A26Q70HW3 274 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 OR2C3Q8N628 320 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 CCDC54Q8NEL0 328 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 OR14L1PQ8NHC6 308 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 CPNE4Q96A23 557 aaPredicted RBP12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 PLEKHA2Q9HB19 425 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 LRFN1Q9P244 771 aa12.65□□□□□ -0.38
LRRFIP1-204ENST00000392000 DHRS3O75911 302 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 EDN3P14138 238 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 MSR1P21757 451 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 GALNSP34059 522 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 DYNLT3P51808 116 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 FAM3AP98173 230 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 PLPPR5Q32ZL2 321 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 UNQ6494/PRO21346Q6UXR6 183 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 ZNF574Q6ZN55 896 aaPredicted RBP12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 CMTM1Q8IZ96 169 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 ZNF441Q8N8Z8 693 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 GJC3Q8NFK1 279 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 HPSE2Q8WWQ2 592 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 THOC3Q96J01 351 aaKnown RBP12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 SGCZQ96LD1 299 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 NIPSNAP3BQ9BS92 247 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 CRYM-AS1A6NIL9 109 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 P2RY1P47900 373 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 ERVFRD-1P60508 538 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 D2HGDHQ8N465 521 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 SYT3Q9BQG1 590 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 HS3ST3B1Q9Y662 390 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 SOX15O60248 233 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 GPR137BO60478 399 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 CTSDP07339 412 aaPredicted RBP12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 FOSL2P15408 326 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 SYT13Q7L8C5 426 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 YRDCQ86U90 279 aaKnown RBP12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 AURKAIP1Q9NWT8 199 aaPredicted RBP12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 MYOTQ9UBF9 498 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 ZDHHC8Q9ULC8 765 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 GAB2Q9UQC2 676 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 STARD10Q9Y365 291 aa12.64□□□□□ -0.39
LRRFIP1-204ENST00000392000 ABCA1O95477 2261 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 A0A087WZY1 265 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 TNFSF11O14788 317 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 CFPP27918 469 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 THBS4P35443 961 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 HLA-BQ31612 363 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 ZNF610Q8N9Z0 462 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 MRPL13Q9BYD1 178 aaKnown RBP12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 UFSP2Q9NUQ7 469 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 GFOD1Q9NXC2 390 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 IGSF23A1L1A6 192 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 HSPA12AO43301 675 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 CD63P08962 238 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 ALDH3B1P43353 468 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 NPBWR2P48146 333 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 HMGN3Q15651 99 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 RSG1Q9BU20 258 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 NXPH1P58417 271 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 SRYQ05066 204 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 ZNF468Q5VIY5 522 aaPredicted RBP12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 DMBX1Q8NFW5 382 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 OR10AD1Q8NGE0 317 aa12.63□□□□□ -0.39
LRRFIP1-204ENST00000392000 MVB12AQ96EY5 273 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms