RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 TRAM2Q15035 370 aa-1.71□□□□□ -2.68
SNORA40-201ENST00000388090 SSX1Q16384 188 aa-1.71□□□□□ -2.68
SNORA40-201ENST00000388090 GLT6D1Q7Z4J2 308 aa-1.71□□□□□ -2.68
SNORA40-201ENST00000388090 IQCKQ8N0W5 287 aa-1.71□□□□□ -2.68
SNORA40-201ENST00000388090 RLN3Q8WXF3 142 aa-1.71□□□□□ -2.68
SNORA40-201ENST00000388090 TMEM237Q96Q45 408 aa-1.71□□□□□ -2.68
SNORA40-201ENST00000388090 TMEM43Q9BTV4 400 aa-1.71□□□□□ -2.68
SNORA40-201ENST00000388090 TTC28Q96AY4 2481 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 TRAV8-6A0A0B4J262 113 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 TRAV41A0A0B4J266 112 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 A0A1W2PRQ8 180 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 TRAPPC13A5PLN9 417 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 RNASEK-C17orf49H0YIS7 233 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 C19orf84I3L1E1 186 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 PTHP01270 115 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 GYPCP04921 128 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 ANXA5P08758 320 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 MCF2P10911 925 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 NCF1P14598 390 aaPredicted RBP-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 CLLU1OSQ5K130 101 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 RAB43Q86YS6 212 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 ASCC1Q8N9N2 400 aaKnown RBP-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 FER1L6-AS1Q8NA97 138 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 OR2M3Q8NG83 312 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 OR8J1Q8NGP2 316 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 MBD3L1Q8WWY6 194 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 PATE1Q8WXA2 126 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 PRRC1Q96M27 445 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 SMDT1Q9H4I9 107 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 ASB7Q9H672 318 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 COQ10BQ9H8M1 238 aa-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 RBM22Q9NW64 420 aaKnown RBP eCLIP-1.72□□□□□ -2.68
SNORA40-201ENST00000388090 MED12LQ86YW9 2145 aa-1.72□□□□□ -2.69
SNORA40-201ENST00000388090 USP47Q96K76 1375 aa-1.72□□□□□ -2.69
SNORA40-201ENST00000388090 LOC100653049A0A140TA62 436 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 K7EQM0 130 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 OR2J3O76001 311 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 KRT34O76011 436 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 MDH1P40925 334 aaKnown RBP-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 EVX1P49640 407 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 SEC61GP60059 68 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 RPL10AP62906 217 aaKnown RBP-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 GBE1Q04446 702 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 GLO1Q04760 184 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 OR2T5Q6IEZ7 315 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 LINC00596Q86U02 117 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 EXOC3-AS1Q8N2X6 119 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 OR2T29Q8NH02 315 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 OR5K2Q8NHB8 316 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 TAMM41Q96BW9 452 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 ZNF707Q96C28 371 aaPredicted RBP-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 DYNLL2Q96FJ2 89 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 TSGA10Q9BZW7 698 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 CST9LQ9H4G1 147 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 GLS2Q9UI32 602 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 TMCC3Q9ULS5 477 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 YLPM1P49750 1951 aaKnown RBP-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 PTPRJQ12913 1337 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 PDZD2O15018 2839 aa-1.73□□□□□ -2.69
SNORA40-201ENST00000388090 PEAK1Q9H792 1746 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 A0A1B0GWJ7 208 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 C2orf74A8MZ97 194 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 SEC22BO75396 215 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 LSM8O95777 96 aaKnown RBP-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 SERPINA3P01011 423 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 RHOCP08134 193 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 CTSEP14091 401 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 NCF2P19878 526 aaPredicted RBP-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 OR2B8PP59922 312 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 MOGQ16653 247 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 NADK2Q4G0N4 442 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 LAIR2Q6ISS4 152 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 BBOF1Q8ND07 529 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 KIFAP3Q92845 792 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 TMEM175Q9BSA9 504 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 IL22Q9GZX6 179 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 ZFP30Q9Y2G7 519 aa-1.74□□□□□ -2.69
SNORA40-201ENST00000388090 HERC1Q15751 4861 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 H3BPC8 53 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 SLC9A3R1O14745 358 aaPredicted RBP-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 SLC37A4O43826 429 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 COX7A2P2O60397 106 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 SNNO75324 88 aaPredicted RBP-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 RNASE3P12724 160 aaKnown RBP-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 NQO1P15559 274 aaKnown RBP-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 EVI2BP34910 448 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 SLC1A1P43005 524 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 PLTPP55058 493 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 C10orf55Q5SWW7 151 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 TEX36Q5VZQ5 186 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 MARCH3Q86UD3 253 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 LRRC75A-AS1Q8N1F1 130 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 CYP4Z2PQ8N1L4 340 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 UBA3Q8TBC4 463 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 CAPSLQ8WWF8 208 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 YPEL4Q96NS1 127 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 ACTR3CQ9C0K3 210 aaPredicted RBP-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 MOSPD1Q9UJG1 213 aa-1.75□□□□□ -2.69
SNORA40-201ENST00000388090 LOC110117498A0A087WWA1 95 aa-1.76□□□□□ -2.69
SNORA40-201ENST00000388090 AIM2O14862 343 aa-1.76□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms