RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 DCUN1D4Q92564 292 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 FER1L6-AS2Q96M78 137 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 SCGB3A2Q96PL1 93 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 RAB18Q9NP72 206 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 OR5AC2Q9NZP5 309 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 KLF13Q9Y2Y9 288 aaPredicted RBP6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 STARD10Q9Y365 291 aa6.86□□□□□ -1.31
PDLIM5-204ENST00000380176 MSGN1A6NI15 193 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF724A8MTY0 619 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 KLRC4-KLRK1H3BQV0 150 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 RRP8O43159 456 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 UBA52P62987 128 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 PMP22Q01453 160 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 SLC10A1Q14973 349 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 RTL6Q6ICC9 239 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 ZFP62Q8NB50 900 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 PXT1Q8NFP0 134 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 HPSE2Q8WWQ2 592 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 CPNE2Q96FN4 548 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 PAPOLGQ9BWT3 736 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 METTL8Q9H825 291 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 COQ3Q9NZJ6 369 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 SPRR3Q9UBC9 169 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 CNOT1A5YKK6 2376 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 GLAP06280 429 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 GPM6AP51674 278 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 RBM11P57052 281 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 PRDX4Q13162 271 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 IGFBP7Q16270 282 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 HIKESHIQ53FT3 197 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 PDZD9Q8IXQ8 264 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 INO80EQ8NBZ0 244 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 LHFPL5Q8TAF8 219 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 OR51B6Q9H340 312 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 MED9Q9NWA0 146 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 RASL12Q9NYN1 266 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 IL36GQ9NZH8 169 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 IL36RNQ9UBH0 155 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 A0A0B4J2A0 478 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 F5H0A9 414 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 OR7C1O76099 320 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 IL18BPO95998 194 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 BCL3P20749 454 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 PCP4P48539 62 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 RELBQ01201 579 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 RAB32Q13637 225 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 COTL1Q14019 142 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 SURF2Q15527 256 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 SLC22A25Q6T423 547 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 SUMF1Q8NBK3 374 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 TOMM40LQ969M1 308 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 SLAMF9Q96A28 289 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 WDYHV1Q96HA8 205 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 POM121L2Q96KW2 1035 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 LDAHQ9H6V9 325 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF552Q9H707 407 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 DECR2Q9NUI1 292 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 GSKIPQ9P0R6 139 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 SHPKQ9UHJ6 478 aa6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 C14orf166Q9Y224 244 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-204ENST00000380176 PRR14LQ5THK1 2151 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 TRBV6-7A0A0A0MS04 114 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 PQLC2LA1A4F0 135 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 SS18L1O75177 396 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 PDCD6O75340 191 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 IFNA2P01563 188 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 WNT5AP41221 380 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 FXYD4P59646 89 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 SUMO1P63165 101 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 ARG2P78540 354 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 IL15RAQ13261 267 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 RBM39Q14498 530 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 ZNF766Q5HY98 468 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 NSUN5P2Q63ZY6 315 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 DHRS11Q6UWP2 260 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 MCEMP1Q8IX19 187 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 STPG2Q8N412 459 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 IP6K3Q96PC2 410 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 RNF122Q9H9V4 155 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 BARX1Q9HBU1 254 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 PARD6AQ9NPB6 346 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 NECAP2Q9NVZ3 263 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 PCP4L1A6NKN8 68 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 NKX2-8O15522 239 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 CTSDP07339 412 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 FGF2P09038 288 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 GLI4P10075 376 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 DTYMKP23919 212 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 CYCSP99999 105 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 RNPS1Q15287 305 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 SP6Q3SY56 376 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 MRPL21Q7Z2W9 205 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 FOXRED2Q8IWF2 684 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 POC1AQ8NBT0 407 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 DEFB124Q8NES8 71 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 APOBEC3DQ96AK3 386 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 MRPS24Q96EL2 167 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 MTCH1Q9NZJ7 389 aa6.84□□□□□ -1.31
PDLIM5-204ENST00000380176 TRGV5A0A0B4J1U4 118 aa6.83□□□□□ -1.32
PDLIM5-204ENST00000380176 TEX13DA0A0J9YY54 714 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms