RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 SEZ6L2Q6UXD5 910 aa5.71□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF519Q8TB69 540 aa5.71□□□□□ -1.5
NEDD9-202ENST00000379446 SFT2D1Q8WV19 159 aa5.71□□□□□ -1.5
NEDD9-202ENST00000379446 PPP1R3EQ9H7J1 279 aa5.71□□□□□ -1.5
NEDD9-202ENST00000379446 ZMAT3Q9HA38 289 aaKnown RBP5.71□□□□□ -1.5
NEDD9-202ENST00000379446 SPACA1Q9HBV2 294 aa5.71□□□□□ -1.5
NEDD9-202ENST00000379446 Q9UFV3 132 aa5.71□□□□□ -1.5
NEDD9-202ENST00000379446 GBF1Q92538 1859 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 TRAV40A0A0B4J280 105 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 A0A0G2JMM0 328 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF816-ZNF321PA0A0X1KG74 233 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 A0A1W2PPB8 328 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 A0A1W2PRS3 328 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 KIR3DP1A8MWS1 328 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 RER1O15258 196 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 KCNAB3O43448 404 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 TBX19O60806 448 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF17P17021 662 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 CXCL2P19875 107 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 SLC6A1P30531 599 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 HOXA1P49639 335 aaPredicted RBP5.7□□□□□ -1.5
NEDD9-202ENST00000379446 OR52W1Q6IF63 320 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 CD300LDQ6UXZ3 194 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 FAM219AQ8IW50 185 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 BVESQ8NE79 360 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 OR10V1Q8NGI7 309 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 OR5D13Q8NGL4 314 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 TCTEX1D2Q8WW35 142 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 MCHR2Q969V1 340 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 IMMP1LQ96LU5 166 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF385AQ96PM9 386 aaKnown RBP5.7□□□□□ -1.5
NEDD9-202ENST00000379446 NUDT16L1Q9BRJ7 211 aaKnown RBP5.7□□□□□ -1.5
NEDD9-202ENST00000379446 AICDAQ9GZX7 198 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 PRO1933Q9H354 126 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ISYNA1Q9NPH2 558 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 OR52A1Q9UKL2 312 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 A0A0B4J2A0 478 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 RPS10-NUDT3A0A1W2PQS6 291 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF785A8K8V0 405 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 AIPO00170 330 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 SULT1B1O43704 296 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 SC5DO75845 299 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ADH4P08319 380 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 HIST1H1CP16403 213 aaKnown RBP5.7□□□□□ -1.5
NEDD9-202ENST00000379446 DCTDP32321 178 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 THBS4P35443 961 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 RAP2BP61225 183 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 FUT7Q11130 342 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 MMDQ15546 238 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 Q56UQ5 140 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 FBXW12Q6X9E4 464 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 OR1M1Q8NGA1 313 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 OR51D1Q8NGF3 324 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 OR5H2Q8NGV7 314 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 RPS4Y2Q8TD47 263 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 SPACA5Q96QH8 159 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 PARP11Q9NR21 331 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 SHPKQ9UHJ6 478 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ING1Q9UK53 422 aaPredicted RBP5.7□□□□□ -1.5
NEDD9-202ENST00000379446 FN1P02751 2386 aaKnown RBP5.7□□□□□ -1.5
NEDD9-202ENST00000379446 DEFB108AA8MXU0 73 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 UPK3AO75631 287 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 RBBP9O75884 186 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ATF1P18846 271 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 PAFAH1B2P68402 229 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 FABP9Q0Z7S8 132 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 TRAM1Q15629 374 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 Q6ZT83 130 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ZAR1Q86SH2 424 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 RFLNBQ8N5W9 214 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF75AQ96N20 296 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 ANKRD19PQ9H560 264 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 PRORYQ9H606 182 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 CMC2Q9NRP2 79 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 LPAR3Q9UBY5 353 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 RABAC1Q9UI14 185 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 USP9YO00507 2555 aaPredicted RBP5.7□□□□□ -1.5
NEDD9-202ENST00000379446 SORL1Q92673 2214 aa5.7□□□□□ -1.5
NEDD9-202ENST00000379446 HEATR1Q9H583 2144 aaKnown RBP5.7□□□□□ -1.5
NEDD9-202ENST00000379446 TCRBV4S1A1TA0A5B7 111 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 PRSS37A4D1T9 235 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 OR6C68A6NDL8 312 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 CD300LBA8K4G0 201 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 FBXO24O75426 580 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 PRH1P02810 166 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 UCP2P55851 309 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 TMEM33P57088 247 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 PDCD1Q15116 288 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 DEFB113Q30KQ7 82 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 NCMAPQ5T1S8 102 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 WDR88Q6ZMY6 472 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 OR2L13Q8N349 312 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 RHOVQ96L33 236 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 LURAP1Q96LR2 239 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 REG4Q9BYZ8 158 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF286AQ9HBT8 521 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 SH2D2AQ9NP31 389 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 TRAV18A0A075B6X5 111 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 LOC390937A0A1W2PQ73 354 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 FAM106CPP0CH98 169 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms