RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 DUX4L6P0CJ89 424 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 DUX4L7P0CJ90 424 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 CALCBP10092 127 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 ZNF44P15621 663 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 NDUFB7P17568 137 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 HNF1AP20823 631 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 SERPINA2P20848 420 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 LMO1P25800 156 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 CEBPDP49716 269 aaPredicted RBP9.88□□□□□ -0.83
PCNA-201ENST00000379143 SNU13P55769 128 aaKnown RBP9.88□□□□□ -0.83
PCNA-201ENST00000379143 PAX2Q02962 417 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 COL10A1Q03692 680 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 MPV17LQ2QL34 196 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 DUX4L9Q6RFH8 374 aaPredicted RBP9.88□□□□□ -0.83
PCNA-201ENST00000379143 BTN2A1Q7KYR7 527 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 OR8H2Q8N162 312 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 ASCC1Q8N9N2 400 aaKnown RBP9.88□□□□□ -0.83
PCNA-201ENST00000379143 OR13F1Q8NGS4 319 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 OR10K1Q8NGX5 313 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 YIPF6Q96EC8 236 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 SNX22Q96L94 193 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 MRI1Q9BV20 369 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 IL36RNQ9UBH0 155 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 DUX4Q9UBX2 424 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 RPUSD1Q9UJJ7 312 aaKnown RBP9.88□□□□□ -0.83
PCNA-201ENST00000379143 ST3GAL6Q9Y274 331 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 INSIG2Q9Y5U4 225 aa9.88□□□□□ -0.83
PCNA-201ENST00000379143 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.87□□□□□ -0.835e-9■■■■■ 34.6
PCNA-201ENST00000379143 TRBV23-1A0A0A0MS06 115 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 DEGS1O15121 323 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 ZNF737O75373 536 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 BPNT1O95861 308 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 OR2H2O95918 312 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 TFF1P04155 84 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 SELLP14151 372 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 ARSBP15848 533 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 GABRR1P24046 479 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 CFPP27918 469 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 DUSP1P28562 367 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 RBM11P57052 281 aaKnown RBP9.87□□□□□ -0.83
PCNA-201ENST00000379143 RAB11BQ15907 218 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 FAHD2BQ6P2I3 314 aaPredicted RBP9.87□□□□□ -0.83
PCNA-201ENST00000379143 GDPD3Q7L5L3 318 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 KCNG3Q8TAE7 436 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 C8orf46Q8TAG6 207 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 H1FXQ92522 213 aaKnown RBP9.87□□□□□ -0.83
PCNA-201ENST00000379143 DACT3Q96B18 629 aaPredicted RBP9.87□□□□□ -0.83
PCNA-201ENST00000379143 FAHD2AQ96GK7 314 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 C1orf147Q96MC9 270 aaPredicted RBP9.87□□□□□ -0.83
PCNA-201ENST00000379143 GFI1Q99684 422 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 NUDT16L1Q9BRJ7 211 aaKnown RBP9.87□□□□□ -0.83
PCNA-201ENST00000379143 DCTN5Q9BTE1 182 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 IFT22Q9H7X7 185 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 MMP26Q9NRE1 261 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 LPAR3Q9UBY5 353 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 CDC42EP3Q9UKI2 254 aa9.87□□□□□ -0.83
PCNA-201ENST00000379143 ABCA1O95477 2261 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 A0A1W2PPH5 198 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 SHISA3A0PJX4 238 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FUOMA2VDF0 154 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A10PA6NDY2 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A18PA6NE21 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A16PA6NEW6 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A20PA6NIJ5 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A8PA6NJQ4 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A7PA6NKC0 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A22PA8MWA6 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A12PA8MX19 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A5PA8MXJ8 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A23PA8MXZ1 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 C22orf46C9J442 243 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 SIRPB1O00241 398 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 MGST3O14880 152 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FCN3O75636 299 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 CRTAPO75718 401 aaPredicted RBP9.86□□□□□ -0.83
PCNA-201ENST00000379143 CSN2P05814 226 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A15PP0C7V4 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A13PP0C7W8 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A14PP0C7W9 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FAM90A24PP0C7X0 464 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 PPIAL4GP0DN37 164 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 MGMTP16455 207 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 SCN1BQ07699 218 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 CR1LQ2VPA4 569 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 PIGYQ3MUY2 71 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 Q6P435 159 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 C17orf107Q6ZR85 190 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 Q71RC1 249 aaPredicted RBP9.86□□□□□ -0.83
PCNA-201ENST00000379143 OR2W3Q7Z3T1 314 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 LY6G5BQ8NDX9 201 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 CENPOQ9BU64 300 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FUNDC2Q9BWH2 189 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 SHARPINQ9H0F6 387 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 C7orf69Q9H7B7 122 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 SPACA1Q9HBV2 294 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 STEAP1Q9UHE8 339 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 JMJD1CQ15652 2540 aa9.86□□□□□ -0.83
PCNA-201ENST00000379143 FN1P02751 2386 aaKnown RBP9.86□□□□□ -0.83
PCNA-201ENST00000379143 A0A0G2JK05 382 aa9.85□□□□□ -0.83
PCNA-201ENST00000379143 A0A1W2PQ09 198 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms