RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 FAM27BQ5VT28 67 aa13.33□□□□□ -0.28
RER1-203ENST00000378513 NSUN5P2Q63ZY6 315 aa13.33□□□□□ -0.28
RER1-203ENST00000378513 PUS1Q9Y606 427 aaKnown RBP eCLIP13.33□□□□□ -0.28
RER1-203ENST00000378513 CLN5O75503 358 aa13.33□□□□□ -0.28
RER1-203ENST00000378513 SVILO95425 2214 aa13.33□□□□□ -0.28
RER1-203ENST00000378513 IFNA21P01568 189 aa13.33□□□□□ -0.28
RER1-203ENST00000378513 CRYGSP22914 178 aa13.33□□□□□ -0.28
RER1-203ENST00000378513 CTSSP25774 331 aa13.33□□□□□ -0.28
RER1-203ENST00000378513 TMEM105Q8N8V8 129 aa13.33□□□□□ -0.28
RER1-203ENST00000378513 TM2D1Q9BX74 207 aa13.33□□□□□ -0.28
RER1-203ENST00000378513 MMP24Q9Y5R2 645 aa13.33□□□□□ -0.28
RER1-203ENST00000378513 RP1L1Q8IWN7 2480 aaPredicted RBP13.33□□□□□ -0.28
RER1-203ENST00000378513 P04436 131 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 TCN2P20062 427 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 GDF1P27539 372 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 C3AR1Q16581 482 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 MIDNQ504T8 468 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 FOXB1Q99853 325 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 SLC2A9Q9NRM0 540 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 TMEM38BQ9NVV0 291 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 C7orf77A4D0Y5 90 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 CRYM-AS1A6NIL9 109 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 CBR3O75828 277 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 ONECUT2O95948 504 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 FGF5P12034 268 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 FOLR3P41439 243 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 SPIN3Q5JUX0 258 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 PMS2CLQ68D20 193 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 CPEB3Q8NE35 698 aaKnown RBP13.32□□□□□ -0.28
RER1-203ENST00000378513 OR2Y1Q8NGV0 311 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 UBALD1Q8TB05 177 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 SPENQ96T58 3664 aaKnown RBP13.32□□□□□ -0.28
RER1-203ENST00000378513 CACNA1DQ01668 2161 aa13.32□□□□□ -0.28
RER1-203ENST00000378513 LOC102725191A0A1B0GVB3 256 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 TNFSF12O43508 249 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 HLA-HP01893 362 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 MLF1P58340 268 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 MRPS34P82930 218 aaKnown RBP13.31□□□□□ -0.28
RER1-203ENST00000378513 NAAAQ02083 359 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 TRIM61Q5EBN2 209 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 IL34Q6ZMJ4 242 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 ZNF600Q6ZNG1 722 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 GGNQ86UU5 652 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 CLDN23Q96B33 292 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 RHOVQ96L33 236 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 WNT5BQ9H1J7 359 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 TINAGQ9UJW2 476 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 MEMO1Q9Y316 297 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 LOC102723996A0A087X1L8 192 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 DEDDO75618 318 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 SMIM6P0DI80 62 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 PET100P0DJ07 73 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 AADACP22760 399 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 CHATP28329 748 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 RPS10P46783 165 aaKnown RBP13.31□□□□□ -0.28
RER1-203ENST00000378513 B3GALT5-AS1P59052 145 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 FAM3AP98173 230 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 CDPF1Q6NVV7 123 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 NAT6Q93015 286 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 TP53RKQ96S44 253 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 EDN3P14138 238 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 RAB35Q15286 201 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 OSR2Q8N2R0 312 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 ZNF565Q8N9K5 539 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 EDARADDQ8WWZ3 215 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 SLAMF9Q96A28 289 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 ZNF488Q96MN9 340 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 ZNF700Q9H0M5 742 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 ZDHHC8Q9ULC8 765 aa13.31□□□□□ -0.28
RER1-203ENST00000378513 EP300Q09472 2414 aaPredicted RBP13.31□□□□□ -0.28
RER1-203ENST00000378513 TRAV39A0A0B4J263 110 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 C5orf52A6NGY3 159 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 VAMP5O95183 116 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 CTSDP07339 412 aaPredicted RBP13.3□□□□□ -0.28
RER1-203ENST00000378513 NEK7Q8TDX7 302 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 NECAP2Q9NVZ3 263 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 ZNF716A6NP11 495 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 ALDH3B1P43353 468 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 HAAOP46952 286 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 RAC3P60763 192 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 HIST1H3AP68431 136 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 TSC22D1Q15714 1073 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 EXT1Q16394 746 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 HIST2H3PS2Q5TEC6 136 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 HIST2H3AQ71DI3 136 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 ZNF611Q8N823 705 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 ABHD14AQ9BUJ0 271 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 OR2H1Q9GZK4 316 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 CALHM2Q9HA72 323 aa13.3□□□□□ -0.28
RER1-203ENST00000378513 A0A087WZY1 265 aa13.29□□□□□ -0.28
RER1-203ENST00000378513 FAM166BA8MTA8 275 aa13.29□□□□□ -0.28
RER1-203ENST00000378513 ATXN7O15265 892 aaPredicted RBP13.29□□□□□ -0.28
RER1-203ENST00000378513 IL11RAQ14626 422 aa13.29□□□□□ -0.28
RER1-203ENST00000378513 ZNF239Q16600 458 aaKnown RBP13.29□□□□□ -0.28
RER1-203ENST00000378513 FBXW12Q6X9E4 464 aa13.29□□□□□ -0.28
RER1-203ENST00000378513 RHBDD1Q8TEB9 315 aa13.29□□□□□ -0.28
RER1-203ENST00000378513 SMIM8Q96KF7 97 aa13.29□□□□□ -0.28
RER1-203ENST00000378513 NAA60Q9H7X0 242 aa13.29□□□□□ -0.28
RER1-203ENST00000378513 WDR54Q9H977 334 aa13.29□□□□□ -0.28
RER1-203ENST00000378513 KCNIP3Q9Y2W7 256 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms