RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PDCD6O75340 191 aa19.19■□□□□ 0.66
HLA-C-202ENST00000376237 OR2H2O95918 312 aa19.19■□□□□ 0.66
HLA-C-202ENST00000376237 TMEM50BP56557 158 aa19.19■□□□□ 0.66
HLA-C-202ENST00000376237 SCN1BQ07699 218 aa19.19■□□□□ 0.66
HLA-C-202ENST00000376237 AKAP6Q13023 2319 aa19.19■□□□□ 0.66
HLA-C-202ENST00000376237 MOGAT2Q3SYC2 334 aa19.19■□□□□ 0.66
HLA-C-202ENST00000376237 SIGIRRQ6IA17 410 aa19.19■□□□□ 0.66
HLA-C-202ENST00000376237 MUC20Q8N307 709 aaPredicted RBP19.19■□□□□ 0.66
HLA-C-202ENST00000376237 C19orf18Q8NEA5 215 aa19.19■□□□□ 0.66
HLA-C-202ENST00000376237 S100ZQ8WXG8 99 aa19.19■□□□□ 0.66
HLA-C-202ENST00000376237 TMEM165Q9HC07 324 aa19.19■□□□□ 0.66
HLA-C-202ENST00000376237 RCC2Q9P258 522 aaKnown RBP19.19■□□□□ 0.66
HLA-C-202ENST00000376237 IGKV1D-17A0A075B6S4 117 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 IGHV2-70P01814 119 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 PTBP1P26599 531 aaKnown RBP eCLIP19.18■□□□□ 0.66
HLA-C-202ENST00000376237 GIFP27352 417 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 CHATP28329 748 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 MNDAP41218 407 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 LSAMPQ13449 338 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 ZMYND11Q15326 602 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 CARTPTQ16568 116 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 DEFB113Q30KQ7 82 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 ATAD3CQ5T2N8 411 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 PERPQ96FX8 193 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 PLEKHJ1Q9NW61 149 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 ZNF222Q9UK12 451 aa19.18■□□□□ 0.66
HLA-C-202ENST00000376237 CELSR2Q9HCU4 2923 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 TRAV18A0A075B6X5 111 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 NDUFS8O00217 210 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 GPR6P46095 362 aaPredicted RBP19.17■□□□□ 0.66
HLA-C-202ENST00000376237 GABRA2P47869 451 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 DSCR9P59020 149 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 PITPNAQ00169 270 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 ZNF45Q02386 682 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 PDCD1Q15116 288 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 CD177Q8N6Q3 437 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 ZNF525Q8N782 197 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 SDSLQ96GA7 329 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 LURAP1Q96LR2 239 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 SOSTQ9BQB4 213 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 ZNF665Q9H7R5 613 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.17■□□□□ 0.66
HLA-C-202ENST00000376237 FBN2P35556 2912 aa19.17■□□□□ 0.66
HLA-C-202ENST00000376237 MCRIP1C9JLW8 97 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 GYPAP02724 150 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 GSTP1P09211 210 aaKnown RBP19.16■□□□□ 0.66
HLA-C-202ENST00000376237 HIST1H1DP16402 221 aaKnown RBP19.16■□□□□ 0.66
HLA-C-202ENST00000376237 TAS2R20P59543 309 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 RBM39Q14498 530 aaKnown RBP19.16■□□□□ 0.66
HLA-C-202ENST00000376237 CDNFQ49AH0 187 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 TMEM155Q4W5P6 130 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 PYHIN1Q6K0P9 492 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 CLEC2AQ6UVW9 174 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 FAM131AQ6UXB0 335 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 ZNF788Q6ZQV5 615 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 DCDC5Q6ZRR9 648 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 SLC36A1Q7Z2H8 476 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 ZNF561Q8N587 486 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 PPP1R35Q8TAP8 253 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 MED30Q96HR3 178 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 ARHGAP5-AS1Q96IT6 56 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 MRPS7Q9Y2R9 242 aaKnown RBP19.16■□□□□ 0.66
HLA-C-202ENST00000376237 SPG11Q96JI7 2443 aa19.16■□□□□ 0.66
HLA-C-202ENST00000376237 TRAV24A0A0B4J272 114 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 NKX6-3A6NJ46 265 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 SLC33A1O00400 549 aaPredicted RBP19.15■□□□□ 0.66
HLA-C-202ENST00000376237 TNFRSF13BO14836 293 aaPredicted RBP19.15■□□□□ 0.66
HLA-C-202ENST00000376237 HLA-DQB1P01920 261 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 COL10A1Q03692 680 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 IL18Q14116 193 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 ZNF260Q3ZCT1 412 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 PLAC9Q5JTB6 97 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 NKAPLQ5M9Q1 402 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 SUMF2Q8NBJ7 301 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 TSC22D3Q99576 134 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 TMEM246Q9BRR3 403 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 PECRQ9BY49 303 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 KAAG1Q9UBP8 84 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 SERPINE3A8MV23 424 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 SIRPB1O00241 398 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 MFNGO00587 321 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 CEBPDP49716 269 aaPredicted RBP19.15■□□□□ 0.66
HLA-C-202ENST00000376237 C6orf201Q7Z4U5 140 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 IZUMO1Q8IYV9 350 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 DTX3Q8N9I9 347 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 FAM168AQ92567 244 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 SNX22Q96L94 193 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 DPCDQ9BVM2 203 aaPredicted RBP19.15■□□□□ 0.66
HLA-C-202ENST00000376237 AUNIPQ9H7T9 357 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 AKIP1Q9NQ31 210 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 ZNF581Q9P0T4 197 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 V9GYH0 126 aa19.15■□□□□ 0.66
HLA-C-202ENST00000376237 CENPEQ02224 2701 aa19.14■□□□□ 0.66
HLA-C-202ENST00000376237 ISPDA4D126 451 aa19.14■□□□□ 0.65
HLA-C-202ENST00000376237 SIGLEC5O15389 551 aa19.14■□□□□ 0.65
HLA-C-202ENST00000376237 CA11O75493 328 aa19.14■□□□□ 0.65
HLA-C-202ENST00000376237 MELTFP08582 738 aa19.14■□□□□ 0.65
HLA-C-202ENST00000376237 AMY2BP19961 511 aa19.14■□□□□ 0.65
HLA-C-202ENST00000376237 KCNJ3P48549 501 aa19.14■□□□□ 0.65
HLA-C-202ENST00000376237 IL13RA1P78552 427 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms