RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 ZFP62Q8NB50 900 aaPredicted RBP13.15□□□□□ -0.31
MSH5-203ENST00000375750 GINS3Q9BRX5 216 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 ZNF700Q9H0M5 742 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 PLEKHA2Q9HB19 425 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 KCNJ16Q9NPI9 418 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 SLC2A9Q9NRM0 540 aa13.15□□□□□ -0.31
MSH5-203ENST00000375750 CACNA1HO95180 2353 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 GPR137BO60478 399 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 S100A8P05109 93 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 JMJD7P0C870 316 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 FOLR3P41439 243 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
MSH5-203ENST00000375750 P2RY1P47900 373 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 HAGHQ16775 308 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 GJC3Q8NFK1 279 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 TP53RKQ96S44 253 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 STRADBQ9C0K7 418 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 METTL1Q9UBP6 276 aaKnown RBP13.14□□□□□ -0.31
MSH5-203ENST00000375750 KCNIP3Q9Y2W7 256 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 BORCS7-ASMTA0A0B4J1R7 106 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 RRP8O43159 456 aaKnown RBP13.14□□□□□ -0.31
MSH5-203ENST00000375750 CYC1P08574 325 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 CD63P08962 238 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 SEC11BP0C7V7 166 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 PAX6P26367 422 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 RPS23P62266 143 aaKnown RBP13.14□□□□□ -0.31
MSH5-203ENST00000375750 SPACA9Q96E40 222 aaPredicted RBP13.14□□□□□ -0.31
MSH5-203ENST00000375750 URGCP-MRPS24S4R325 110 aa13.14□□□□□ -0.31
MSH5-203ENST00000375750 NSG1A0A0A6YYJ2 146 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
MSH5-203ENST00000375750 SPINK2P20155 84 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 NSUN5P2Q63ZY6 315 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 DHRS13Q6UX07 377 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 SLC35G3Q8N808 338 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 OR10AD1Q8NGE0 317 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 MSI2Q96DH6 328 aaKnown RBP13.13□□□□□ -0.31
MSH5-203ENST00000375750 C18orf12Q96KH6 178 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 NELFAQ9H3P2 528 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 NECAP2Q9NVZ3 263 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 ASPMQ8IZT6 3477 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 NKX2-6A6NCS4 301 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 DKK1O94907 266 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 OTX2P32243 289 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 FAM189A2Q15884 450 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 ZNF774Q6NX45 483 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 C6orf15Q6UXA7 325 aaPredicted RBP13.13□□□□□ -0.31
MSH5-203ENST00000375750 FBXL14Q8N1E6 418 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 RNF138Q8WVD3 245 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 TAAR9Q96RI9 348 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 TMEM9BQ9NQ34 198 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 TINAGQ9UJW2 476 aa13.13□□□□□ -0.31
MSH5-203ENST00000375750 C9orf172C9J069 976 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 PPIHO43447 177 aaKnown RBP13.12□□□□□ -0.31
MSH5-203ENST00000375750 OR2C1O95371 312 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 RPS10P46783 165 aaKnown RBP13.12□□□□□ -0.31
MSH5-203ENST00000375750 UCP2P55851 309 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 LIAT1Q6ZQX7 453 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 PP6455Q8WZ26 134 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 NTNG2Q96CW9 530 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 METTL9Q9H1A3 318 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 P4HTMQ9NXG6 502 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 FOXJ2Q9P0K8 574 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 TCFL5Q9UL49 500 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 A0A0U1RQV5 110 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 IGSF23A1L1A6 192 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 H7C1Q1 480 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 AP4M1O00189 453 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 NDUFS6O75380 124 aaKnown RBP13.12□□□□□ -0.31
MSH5-203ENST00000375750 AADACP22760 399 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 NTF4P34130 210 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 HMGN3Q15651 99 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 CT55Q8WUE5 264 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 DECR2Q9NUI1 292 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 CHCHD2Q9Y6H1 151 aaPredicted RBP13.12□□□□□ -0.31
MSH5-203ENST00000375750 KNTC1P50748 2209 aa13.12□□□□□ -0.31
MSH5-203ENST00000375750 IFITM10A6NMD0 228 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 H0YL77 283 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 TLX3O43711 291 aaPredicted RBP13.11□□□□□ -0.31
MSH5-203ENST00000375750 CTSSP25774 331 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 CHATP28329 748 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 MSX1P28360 303 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 EWSR1Q01844 656 aaKnown RBP eCLIP13.11□□□□□ -0.31
MSH5-203ENST00000375750 EXT1Q16394 746 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 C9orf152Q5JTZ5 239 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 ZNF468Q5VIY5 522 aaPredicted RBP13.11□□□□□ -0.31
MSH5-203ENST00000375750 LINC00469Q8N7U9 141 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 HDGFL3Q9Y3E1 203 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 C3orf80F5H4A9 247 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 DHHO43323 396 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 EIF2S3P41091 472 aaKnown RBP13.11□□□□□ -0.31
MSH5-203ENST00000375750 LSM6P62312 80 aaKnown RBP13.11□□□□□ -0.31
MSH5-203ENST00000375750 RUNX1Q01196 453 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 RAET1LQ5VY80 246 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 TMEM217Q8N7C4 229 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 ADPRHL1Q8NDY3 354 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 OR2G3Q8NGZ4 309 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 M1APQ8TC57 530 aa13.11□□□□□ -0.31
MSH5-203ENST00000375750 FRYQ5TBA9 3013 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms