RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PHF7Q9BWX1 381 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 G6PC2Q9NQR9 355 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 NPDC1Q9NQX5 325 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 B3GAT1Q9P2W7 334 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 ANXA10Q9UJ72 324 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 TRAPPC1Q9Y5R8 145 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 SPINK4O60575 86 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 HOXD4P09016 255 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 CTXN2P0C2S0 81 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 NHLH2Q02577 135 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 RHOVQ96L33 236 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 GFI1Q99684 422 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 OR2D2Q9H210 308 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 UNC13CQ8NB66 2214 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 KRASP01116 189 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 RAB5AP20339 215 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 RPS11P62280 158 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 RNF151Q2KHN1 245 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 ACOT6Q3I5F7 207 aaPredicted RBP5.75□□□□□ -1.49
SMC1A-202ENST00000375340 PCOLCE2Q9UKZ9 415 aa5.75□□□□□ -1.49
SMC1A-202ENST00000375340 PRR32B1ATL7 298 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 CBR3O75828 277 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 HKR1P10072 659 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 CCL3P10147 92 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 TMEM50BP56557 158 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 SLC38A11Q08AI6 406 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 CLN3Q13286 438 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 MPV17LQ2QL34 196 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 ATRAIDQ6UW56 229 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 UBE2ZQ9H832 354 aaPredicted RBP5.74□□□□□ -1.49
SMC1A-202ENST00000375340 TCF20Q9UGU0 1960 aaKnown RBP5.74□□□□□ -1.49
SMC1A-202ENST00000375340 TRDCB7Z8K6 153 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 ZBTB25P24278 435 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 LPAR6P43657 344 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 P2RY1P47900 373 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 SRSF3P84103 164 aaKnown RBP5.74□□□□□ -1.49
SMC1A-202ENST00000375340 EWSR1Q01844 656 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMC1A-202ENST00000375340 EGR4Q05215 589 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 CEBPEQ15744 281 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 OR2C3Q8N628 320 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 UCK1Q9HA47 277 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 DECR2Q9NUI1 292 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 EIF3GO75821 320 aaKnown RBP eCLIP5.74□□□□□ -1.49
SMC1A-202ENST00000375340 FBP1P09467 338 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 MPGP29372 298 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF519Q8TB69 540 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 BORCS7Q96B45 105 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 WDR13Q9H1Z4 485 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 RYDENQ9NUL5 291 aaKnown RBP5.74□□□□□ -1.49
SMC1A-202ENST00000375340 FKBP2P26885 142 aaKnown RBP5.74□□□□□ -1.49
SMC1A-202ENST00000375340 ARL3P36405 182 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 NXPH1P58417 271 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 OR1C1Q15619 314 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 UNQ9370/PRO34162Q6UXP9 181 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 KMT5CQ86Y97 462 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 SLC26A1Q9H2B4 701 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 WSB1Q9Y6I7 421 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 BRWD1Q9NSI6 2320 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 TRBV23-1A0A0A0MS06 115 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 IGLV1-36A0A0B4J1U3 117 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 G3V3Q6 166 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 KLRC4-KLRK1H3BQV0 150 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 DEDDO75618 318 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 DTYMKP23919 212 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 GAS1P54826 345 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 PMS2P11Q13670 270 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 IL13RA2Q14627 380 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF260Q3ZCT1 412 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 C1orf53Q5VUE5 145 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 OR10P1Q8NGE3 313 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 SNX22Q96L94 193 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 C5orf66Q9H5L9 145 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 C7orf77A4D0Y5 90 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 MAP1LC3B2A6NCE7 125 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 SLC22A20A6NK97 555 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 MS4A18H0YCH9 400 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 J3QRE1 110 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 AP4M1O00189 453 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 C1QL1O75973 258 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 CHRNA7P36544 502 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 MS4A18Q3C1V0 323 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 OR52M1Q8NGK5 317 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 TMEM37Q8WXS4 190 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 LURAP1Q96LR2 239 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 TAAR6Q96RI8 345 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 MAP1LC3BQ9GZQ8 125 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 TMPRSS5Q9H3S3 457 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 FAM206AQ9NX38 181 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 OR2M5A3KFT3 312 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 NDUFB7P17568 137 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 OR1J1Q8NGS3 322 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 ADIPOR1Q96A54 375 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 DAZAP1Q96EP5 407 aaKnown RBP5.74□□□□□ -1.49
SMC1A-202ENST00000375340 ZNF488Q96MN9 340 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 TMEM204Q9BSN7 226 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 SOX7Q9BT81 388 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 EDEM2Q9BV94 578 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 C5orf67F2Z3F1 127 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 OR10J4P0C629 311 aa5.74□□□□□ -1.49
SMC1A-202ENST00000375340 PGA4P0DJD7 388 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms