RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ST3GAL6Q9Y274 331 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 F8P00451 2351 aa12.45□□□□□ -0.42
HSPG2-201ENST00000374673 CELSR1Q9NYQ6 3014 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 LOC105371242A0A075B767 164 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 TMEM82A0PJX8 343 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 NOTOA8MTQ0 251 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 TMEM14DPA8MWL7 114 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 C22orf46C9J442 243 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 AIPO00170 330 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 GABARAPO95166 117 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 TK1P04183 234 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 VSIG8P0DPA2 414 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 ZNF44P15621 663 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 MGMTP16455 207 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 GATA3P23771 443 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 MPV17LQ2QL34 196 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 HES5Q5TA89 166 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 C17orf107Q6ZR85 190 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 SLC16A12Q6ZSM3 486 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 ASCC1Q8N9N2 400 aaKnown RBP12.44□□□□□ -0.42
HSPG2-201ENST00000374673 TMEM104Q8NE00 496 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 PPP1R35Q8TAP8 253 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 RAB40AQ8WXH6 277 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 DCTN5Q9BTE1 182 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 SHARPINQ9H0F6 387 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 IFT22Q9H7X7 185 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 HIF1ANQ9NWT6 349 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 KCNS2Q9ULS6 477 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 ACANP16112 2415 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 HIVEP1P15822 2718 aa12.44□□□□□ -0.42
HSPG2-201ENST00000374673 DSCAML1Q8TD84 2053 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 IGHV2-70DA0A0C4DH43 119 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A10PA6NDY2 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A18PA6NE21 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A16PA6NEW6 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A20PA6NIJ5 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A8PA6NJQ4 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A7PA6NKC0 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A22PA8MWA6 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A12PA8MX19 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A5PA8MXJ8 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A23PA8MXZ1 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 SIRPB1O00241 398 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 DEGS1O15121 323 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 ENSAO43768 121 aaKnown RBP12.43□□□□□ -0.42
HSPG2-201ENST00000374673 PSPNO60542 156 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 CRTAPO75718 401 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A15PP0C7V4 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A13PP0C7W8 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A14PP0C7W9 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM90A24PP0C7X0 464 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 ARSBP15848 533 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 NDUFB7P17568 137 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 TGFBR1P36897 503 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 LSM3P62310 102 aaKnown RBP12.43□□□□□ -0.42
HSPG2-201ENST00000374673 QRFPP83859 136 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 UNC119Q13432 240 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 P2RY14Q15391 338 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 BTN2A1Q7KYR7 527 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 OR2W3Q7Z3T1 314 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 OR8H2Q8N162 312 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 OR5D13Q8NGL4 314 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 KCNG3Q8TAE7 436 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 C8orf46Q8TAG6 207 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FAM3DQ96BQ1 224 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 POM121Q96HA1 1249 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 Q96M66 194 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 DMRTB1Q96MA1 342 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 NUDT16L1Q9BRJ7 211 aaKnown RBP12.43□□□□□ -0.42
HSPG2-201ENST00000374673 BANF2Q9H503 90 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 MMP26Q9NRE1 261 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 YAE1D1Q9NRH1 226 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 TMEM160Q9NX00 188 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 FBLN5Q9UBX5 448 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 RPUSD1Q9UJJ7 312 aaKnown RBP12.43□□□□□ -0.42
HSPG2-201ENST00000374673 INSIG2Q9Y5U4 225 aa12.43□□□□□ -0.42
HSPG2-201ENST00000374673 MAP1AP78559 2803 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-201ENST00000374673 TRBV23-1A0A0A0MS06 115 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 A0A0G2JMP0 313 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 A0A0X1KG70 313 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 KIR2DS1A0A191URI9 304 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 SMIM30A4D0T7 59 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 A8MV72 311 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-201ENST00000374673 J3QLI3 93 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 SLC33A1O00400 549 aaPredicted RBP12.42□□□□□ -0.42
HSPG2-201ENST00000374673 GEMIN2O14893 280 aaKnown RBP12.42□□□□□ -0.42
HSPG2-201ENST00000374673 LDLRAD4O15165 306 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 MPIG6BO95866 241 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 CLEC2LP0C7M8 214 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 GABRR1P24046 479 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 OR3A1P47881 315 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 CLDN12P56749 244 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 MXD1Q05195 221 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 SCN1BQ07699 218 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 PDCD1Q15116 288 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 CTF1Q16619 201 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 DCAF12L2Q5VW00 463 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 GPR107Q5VW38 600 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 OR10K2Q6IF99 312 aa12.42□□□□□ -0.42
HSPG2-201ENST00000374673 SFXN4Q6P4A7 337 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms