RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 NT5CQ8TCD5 201 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 H1FXQ92522 213 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 TMEM70Q9BUB7 260 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 C1QTNF6Q9BXI9 259 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 PGA4P0DJD7 388 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 PGA5P0DJD9 388 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 ZNF816Q0VGE8 651 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 SCCPDHQ8NBX0 429 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 TREM2Q9NZC2 230 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 SMCHD1A6NHR9 2005 aa12.54□□□□□ -0.4
RAPGEF1-202ENST00000372190 PYCARD-AS1I3L0S3 204 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 FCMRO60667 390 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 ZNF324O75467 553 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 DCTDP32321 178 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 AUNIPQ9H7T9 357 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 EPOPA6NHQ4 379 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 CD14P08571 375 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 RPL30P62888 115 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR5AS1Q8N127 324 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 IER3P46695 156 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 POLR2GP62487 172 aaKnown RBP eCLIP12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 ALG14Q96F25 216 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 HSF4Q9ULV5 492 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 UFC1Q9Y3C8 167 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 DLL1O00548 723 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 CDK2AP1O14519 115 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 TMPRSS11DO60235 418 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 DOK2O60496 412 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 CYC1P08574 325 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR10AG1Q8NH19 301 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR1L1Q8NH94 360 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 PFN4Q8NHR9 129 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 ZNF502Q8TBZ5 544 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 MOSPD3O75425 235 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 MBPP02686 304 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 RNASE1P07998 156 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 DRD3P35462 400 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 CLDN15P56746 228 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 STPG1Q5TH74 334 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 TRAT1Q6PIZ9 186 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 LIMS2Q7Z4I7 341 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR1P1Q8NH06 330 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 C11orf40Q8WZ69 217 aa12.53□□□□□ -0.4
RAPGEF1-202ENST00000372190 EIF3GO75821 320 aaKnown RBP eCLIP12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 C17orf78Q8N4C9 275 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 PRDM6Q9NQX0 595 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 C1QTNF9BB2RNN3 333 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 TNFSF11O14788 317 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 CELA2BP08218 269 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 PGA3P0DJD8 388 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 EDDM3AQ14507 147 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 PLA1AQ53H76 456 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 ZNF880Q6PDB4 577 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 CALHM3Q86XJ0 350 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 RIMKLAQ8IXN7 391 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 OR10S1Q8NGN2 331 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 C16orf52Q8NHV5 167 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 RAB40CQ96S21 281 aa12.52□□□□□ -0.4
RAPGEF1-202ENST00000372190 RGPD3A6NKT7 1758 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 IGHV5-51A0A0C4DH38 117 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 SRP14P37108 136 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 KHDC3LQ587J8 217 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 FBXO17Q96EF6 278 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 PRR14Q9BWN1 585 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 JAM3Q9BX67 310 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 PLSCR4Q9NRQ2 329 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 POLDIP2Q9Y2S7 368 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 IGSF23A1L1A6 192 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 SERPINE3A8MV23 424 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 H3BQ15 152 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 HS3ST1O14792 307 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 CD74P04233 296 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 NRXN2Q9P2S2 1712 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 MCM3APO60318 1980 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 FRG2CA6NGY1 282 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 IFITM5A6NNB3 132 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 NDUFB6O95139 128 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 SLC38A11Q08AI6 406 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 MS4A7Q9GZW8 240 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 CHRNA10Q9GZZ6 450 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 COX11Q9Y6N1 276 aa12.52□□□□□ -0.41
RAPGEF1-202ENST00000372190 LRRC37AA6NMS7 1700 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 DNAL4O96015 105 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 INHBBP09529 407 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 ST3GAL2Q16842 350 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 RBM45Q8IUH3 476 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 NUDT8Q8WV74 236 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 SIGLEC5O15389 551 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 SELEP16581 610 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 CLDN18P56856 261 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 IL13RA2Q14627 380 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 MRPL54Q6P161 138 aaKnown RBP12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 LINC00346Q8IVM7 164 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 ZNF511Q8NB15 262 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 POM121L2Q96KW2 1035 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 GUCD1Q96NT3 240 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 TMPRSS13Q9BYE2 586 aa12.51□□□□□ -0.41
RAPGEF1-202ENST00000372190 OPN4Q9UHM6 478 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms