RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 MRPL21Q7Z2W9 205 aaKnown RBP1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR2M3Q8NG83 312 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR51A7Q8NH64 312 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 PYURFQ96I23 114 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 COA1Q9GZY4 146 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 TUBG2Q9NRH3 451 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 CYB5R1Q9UHQ9 305 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 SLC7A11Q9UPY5 501 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 COL6A6A6NMZ7 2263 aa1.14□□□□□ -2.23
RNU4-28P-201ENST00000364739 MDC1Q14676 2089 aaKnown RBP1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 TRBV24-1A0A075B6N3 115 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 C19orf71A6NCJ1 209 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR2AT4A6NND4 320 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 SLC37A4O43826 429 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 M6PRP20645 277 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 PSMB9P28065 219 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 HTR2BP41595 481 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 TMEM176BQ3YBM2 270 aaPredicted RBP1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR6K3Q8NGY3 331 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR2M4Q96R27 311 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 SLC38A1Q9H2H9 487 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 SDHAF3Q9NRP4 125 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 RHBDD3Q9Y3P4 386 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 AMMECR1Q9Y4X0 333 aaPredicted RBP1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 CEP170Q5SW79 1584 aa1.13□□□□□ -2.23
RNU4-28P-201ENST00000364739 LY6LH3BQJ8 138 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 TP53I11O14683 189 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 CASQ2O14958 399 aaPredicted RBP1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 RAB36O95755 333 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR5AL1P0C617 328 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 CNTFRP26992 372 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 BLVRBP30043 206 aaPredicted RBP1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 MAGEA1P43355 309 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 PSMD4P55036 377 aaKnown RBP1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 RPL31P62899 125 aaKnown RBP1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 SLC35B1P78383 322 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 ATP6AP1LQ52LC2 224 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 ERICH5Q6P6B1 374 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 COMMD1Q8N668 190 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR6K6Q8NGW6 343 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 GPR119Q8TDV5 335 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 CERS2Q96G23 380 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 RILPQ96NA2 401 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 TSNAXQ99598 290 aaKnown RBP1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 ANAPC13Q9BS18 74 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 ANP32EQ9BTT0 268 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 SHCBP1LQ9BZQ2 653 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 TSGA10Q9BZW7 698 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 AICDAQ9GZX7 198 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 C12orf4Q9NQ89 552 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 C14orf166Q9Y224 244 aaKnown RBP1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 CFL2Q9Y281 166 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 URGCP-MRPS24S4R325 110 aa1.12□□□□□ -2.23
RNU4-28P-201ENST00000364739 LECT2O14960 151 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 POP7O75817 140 aaKnown RBP1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 SCGB1C2P0DMR2 95 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR12D1P0DN82 309 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 ANXA8P13928 327 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 GALP22466 123 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 HTR2CP28335 458 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 RAB11BQ15907 218 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 ANXA8L1Q5VT79 327 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 PLCXD3Q63HM9 321 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 TMEM215Q68D42 235 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 LAIR2Q6ISS4 152 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 SLC25A25Q6KCM7 469 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 ZNF767PQ75MW2 155 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 GALNT10Q86SR1 603 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 NELFCDQ8IXH7 590 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 PROKR2Q8NFJ6 384 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 SCGB1C1Q8TD33 95 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 GPX8Q8TED1 209 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 FMC1Q96HJ9 113 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 POMKQ9H5K3 350 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 PLEKHA1Q9HB21 404 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 TAS2R9Q9NYW1 312 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 SLC23A2Q9UGH3 650 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 FLVCR2Q9UPI3 526 aa1.11□□□□□ -2.23
RNU4-28P-201ENST00000364739 SLC5A10A0PJK1 596 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR5H14A6NHG9 310 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 H7C2Y5 167 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 AKR7A2O43488 359 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 SH2D1AO60880 128 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 GPR75O95800 540 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 FGF4P08620 206 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 SS18Q15532 418 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 TOMM34Q15785 309 aaPredicted RBP1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 Q499Y3 187 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 SYT6Q5T7P8 510 aaPredicted RBP1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 ULK3Q6PHR2 472 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 OR11G2Q8NGC1 345 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 GLYATL2Q8WU03 294 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 TWIST2Q8WVJ9 160 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 LINC01587Q99440 93 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 CXCL16Q9H2A7 254 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 ANXA10Q9UJ72 324 aa1.1□□□□□ -2.23
RNU4-28P-201ENST00000364739 NYNRINQ9P2P1 1898 aaKnown RBP1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 LOC100653049A0A140TA62 436 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 A0A1W2PRF3 423 aa1.09□□□□□ -2.23
RNU4-28P-201ENST00000364739 A0A1W2PRM7 423 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms