RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MPGP29372 298 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 SPATA46Q5T0L3 261 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 RBMXL3Q8N7X1 1067 aaKnown RBP10.93□□□□□ -0.66
GGPS1-202ENST00000358966 OR6K3Q8NGY3 331 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 CLCC1Q96S66 551 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 MRI1Q9BV20 369 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 LINC00470Q9BZP3 86 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 SELENOIQ9C0D9 397 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 CHST5Q9GZS9 411 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 OR10A4Q9H209 315 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 CLCF1Q9UBD9 225 aa10.93□□□□□ -0.66
GGPS1-202ENST00000358966 M0QYG6 137 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 SOCS1O15524 211 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 PMP2P02689 132 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 CD3DP04234 171 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 CD37P11049 281 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 LINC00303Q3SY05 128 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 C15orf54Q8N8G6 183 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 SEMA6DQ8NFY4 1073 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 EXTL1Q92935 676 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 PRDM14Q9GZV8 571 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 HEATR1Q9H583 2144 aaKnown RBP10.92□□□□□ -0.66
GGPS1-202ENST00000358966 ZNF69Q9UC07 566 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 COL6A6A6NMZ7 2263 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 ANKRD20A5PA0PJZ0 165 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 MNDAP41218 407 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 FAM3AP98173 230 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 MPPED2Q15777 294 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 PLEKHN1Q494U1 663 aaPredicted RBP10.92□□□□□ -0.66
GGPS1-202ENST00000358966 FBXW9Q5XUX1 488 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 SPICQ8N5J4 248 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 OR4C16Q8NGL9 310 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 TNFAIP8L1Q8WVP5 186 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 SEH1LQ96EE3 360 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 NCOR1P1Q9H4R4 102 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 ASF1BQ9NVP2 202 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 KCNIP3Q9Y2W7 256 aa10.92□□□□□ -0.66
GGPS1-202ENST00000358966 IFITM10A6NMD0 228 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 RPL36A-HNRNPH2H7BZ11 118 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 LILRA1O75019 489 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 OR2A4O95047 310 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 GTF2F2P13984 249 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 PRSS3P35030 304 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 GSK3AP49840 483 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 PCBD1P61457 104 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 ETFRF1Q6IPR1 90 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 SPACA3Q8IXA5 215 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 UBAC2Q8NBM4 344 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 SSC4DQ8WTU2 575 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 ABHD17AQ96GS6 310 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 OR2A7Q96R45 310 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 TMEM231Q9H6L2 316 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 SMCO4Q9NRQ5 59 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 H7C417 338 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 IFNA2P01563 188 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 RPS2P15880 293 aaKnown RBP10.91□□□□□ -0.66
GGPS1-202ENST00000358966 IGHV1-2P23083 117 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 S100A2P29034 98 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 RSU1Q15404 277 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 KRTAP27-1Q3LI81 207 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 PLAC9Q5JTB6 97 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 MDP1Q86V88 176 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 PIGCQ92535 297 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 MFFQ9GZY8 342 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 LPAR5Q9H1C0 372 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 MTFP1Q9UDX5 166 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 ARID1AO14497 2285 aa10.91□□□□□ -0.66
GGPS1-202ENST00000358966 hCG_38984A0A1B0GV85 526 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 CDC14BO60729 498 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 NPSP0C0P6 89 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 RBMXP38159 391 aaKnown RBP10.9□□□□□ -0.66
GGPS1-202ENST00000358966 AKR1C3P42330 323 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 RAD52P43351 418 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 OR2B8PP59922 312 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 PDCD1Q15116 288 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 OR56B2PQ8NGI1 322 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 OR1K1Q8NGR3 316 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 FOXRED1Q96CU9 486 aaPredicted RBP10.9□□□□□ -0.66
GGPS1-202ENST00000358966 GAB2Q9UQC2 676 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 STARD10Q9Y365 291 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 IGHV3-64DA0A0J9YX35 117 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 TMEM14DPA8MWL7 114 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 ARPC1BO15143 372 aaKnown RBP10.9□□□□□ -0.66
GGPS1-202ENST00000358966 BPNT1O95861 308 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 THBS4P35443 961 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 MTCP1P56278 107 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 SCAND1P57086 179 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 NKPD1Q17RQ9 610 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 TMEM59Q9BXS4 323 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 TREM1Q9NP99 234 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 DKK4Q9UBT3 224 aa10.9□□□□□ -0.66
GGPS1-202ENST00000358966 PLCE1Q9P212 2302 aa10.89□□□□□ -0.67
GGPS1-202ENST00000358966 ZNF705EA8MWA4 302 aaPredicted RBP10.89□□□□□ -0.67
GGPS1-202ENST00000358966 EREGO14944 169 aa10.89□□□□□ -0.67
GGPS1-202ENST00000358966 ERCC1P07992 297 aaPredicted RBP10.89□□□□□ -0.67
GGPS1-202ENST00000358966 WNT5AP41221 380 aa10.89□□□□□ -0.67
GGPS1-202ENST00000358966 KIR2DL2P43627 348 aaPredicted RBP10.89□□□□□ -0.67
GGPS1-202ENST00000358966 OR3A2P47893 321 aa10.89□□□□□ -0.67
GGPS1-202ENST00000358966 ERVS71-1P61550 626 aa10.89□□□□□ -0.67
GGPS1-202ENST00000358966 SEM1Q6ZVN7 128 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms