RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 B3GAT1Q9P2W7 334 aa5.74□□□□□ -1.49
CSDE1-203ENST00000358528 CHD9Q3L8U1 2897 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 ICE1Q9Y2F5 2266 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 C3orf85A0A1B0GTC6 90 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 SRSF10O75494 262 aaKnown RBP5.73□□□□□ -1.49
CSDE1-203ENST00000358528 P2RY1P47900 373 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 MLF1P58340 268 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 COL13A1Q5TAT6 717 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-203ENST00000358528 MRPL21Q7Z2W9 205 aaKnown RBP5.73□□□□□ -1.49
CSDE1-203ENST00000358528 LFNGQ8NES3 379 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 RPUSD4Q96CM3 377 aaKnown RBP5.73□□□□□ -1.49
CSDE1-203ENST00000358528 RASL10BQ96S79 203 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 WFDC1Q9HC57 220 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 TRIOBPQ9H2D6 2365 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 SMCO3A2RU48 225 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 CRYM-AS1A6NIL9 109 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 CD300LBA8K4G0 201 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF587BE7ETH6 402 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 TERTO14746 1132 aaKnown RBP5.73□□□□□ -1.49
CSDE1-203ENST00000358528 GDF9O60383 454 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 GLB1P16278 677 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 BMP5P22003 454 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 HAAOP46952 286 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 CCL20P78556 96 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 TLE4Q04727 773 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 CEACAM16Q2WEN9 425 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 GUSBP11Q6P575 273 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 SLC25A47Q6Q0C1 308 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 IL22RA1Q8N6P7 574 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 GPR61Q9BZJ8 451 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 HSF4Q9ULV5 492 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 SZT2Q5T011 3432 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 THADAQ6YHU6 1953 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 CCDC187A0A096LP49 1063 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 TRBV6-7A0A0A0MS04 114 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 TGIF2-C20orf24A0A0A6YYL0 155 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 NDUFS6O75380 124 aaKnown RBP5.73□□□□□ -1.49
CSDE1-203ENST00000358528 IGHMP01871 453 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 TRGC2P03986 189 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 P04436 131 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 SEC11BP0C7V7 166 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 MMP9P14780 707 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 EIF1P41567 113 aaKnown RBP5.73□□□□□ -1.49
CSDE1-203ENST00000358528 SUMO3P55854 103 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-203ENST00000358528 CARD18P57730 90 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 RAB1AP62820 205 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 SRSF4Q08170 494 aaKnown RBP5.73□□□□□ -1.49
CSDE1-203ENST00000358528 SPANXN5Q5MJ07 72 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 NSUN5P2Q63ZY6 315 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 TBC1D26Q86UD7 250 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 EXTL1Q92935 676 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 RBMXL1Q96E39 390 aaKnown RBP5.73□□□□□ -1.49
CSDE1-203ENST00000358528 MEGF10Q96KG7 1140 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 CHST5Q9GZS9 411 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 PPP1R3CQ9UQK1 317 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 MTCH2Q9Y6C9 303 aa5.73□□□□□ -1.49
CSDE1-203ENST00000358528 TPRP12270 2363 aaKnown RBP5.72□□□□□ -1.49
CSDE1-203ENST00000358528 CEP250Q9BV73 2442 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 TSTD3H0UI37 97 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 CHST1O43916 411 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 GAPDHP04406 335 aaKnown RBP5.72□□□□□ -1.49
CSDE1-203ENST00000358528 CD5P06127 495 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 DANCRP0C864 163 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 GABRA4P48169 554 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 SURF2Q15527 256 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-203ENST00000358528 RAB30Q15771 203 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 LINC00469Q8N7U9 141 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 OR2M3Q8NG83 312 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 FRZBQ92765 325 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF501Q96CX3 271 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-203ENST00000358528 TVP23CQ96ET8 276 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 LYZL4Q96KX0 146 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 SNX22Q96L94 193 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 GGACTQ9BVM4 153 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 OR51M1Q9H341 326 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 SLC7A10Q9NS82 523 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 DOK5Q9P104 306 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 HDGFL3Q9Y3E1 203 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 POMT1Q9Y6A1 747 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 C2orf16Q68DN1 1984 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 C5orf52A6NGY3 159 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 TRAPPC2LH3BP13 241 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 WDR1O75083 606 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 PPYP01298 95 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 METTL15P1P0C7V9 234 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 CCL3P10147 92 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 GDF1P27539 372 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 GPM6AP51674 278 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 PHYHD1Q5SRE7 291 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF880Q6PDB4 577 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 WDR5BQ86VZ2 330 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 MCEMP1Q8IX19 187 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 MKXQ8IYA7 352 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 D2HGDHQ8N465 521 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF611Q8N823 705 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 OR10AD1Q8NGE0 317 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 POC1BQ8TC44 478 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 PSMF1Q92530 271 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 SDSLQ96GA7 329 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 MARS2Q96GW9 593 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms