RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 SMIM30A4D0T7 59 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A10PA6NDY2 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A18PA6NE21 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A16PA6NEW6 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A20PA6NIJ5 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A8PA6NJQ4 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A7PA6NKC0 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A22PA8MWA6 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 TMEM14DPA8MWL7 114 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A12PA8MX19 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A5PA8MXJ8 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A23PA8MXZ1 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 K7N7A8 449 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 PHF1O43189 567 aaPredicted RBP12.91□□□□□ -0.34
TRIM13-201ENST00000356017 MPIG6BO95866 241 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 TGFAP01135 160 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 TK1P04183 234 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 CLEC2LP0C7M8 214 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A15PP0C7V4 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A13PP0C7W8 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A14PP0C7W9 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM90A24PP0C7X0 464 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 TGFBR1P36897 503 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 RPS19P39019 145 aaKnown RBP12.91□□□□□ -0.34
TRIM13-201ENST00000356017 CLDN12P56749 244 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 SCN1BQ07699 218 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM189A2Q15884 450 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 USP43Q70EL4 1123 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 ST8SIA4Q92187 359 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 FAM46BQ96A09 425 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 MSI2Q96DH6 328 aaKnown RBP12.91□□□□□ -0.34
TRIM13-201ENST00000356017 URM1Q9BTM9 101 aaKnown RBP12.91□□□□□ -0.34
TRIM13-201ENST00000356017 BANF2Q9H503 90 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 IFT22Q9H7X7 185 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 SPACA1Q9HBV2 294 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 TRAV20A0A0B4J274 112 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 PPIAL4CA0A0B4J2A2 164 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 A0A1B0GW55 424 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 GEMIN2O14893 280 aaKnown RBP12.91□□□□□ -0.34
TRIM13-201ENST00000356017 ZNF737O75373 536 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 OR7C1O76099 320 aaPredicted RBP12.91□□□□□ -0.34
TRIM13-201ENST00000356017 TFF1P04155 84 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 DUX4L2P0CJ85 424 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 DUX4L3P0CJ86 424 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 DUX4L4P0CJ87 422 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 DUX4L5P0CJ88 424 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 DUX4L6P0CJ89 424 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 DUX4L7P0CJ90 424 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 NDUFB7P17568 137 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 GABRR1P24046 479 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 LCN2P80188 198 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 QRFPP83859 136 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 TAF9Q16594 264 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 Q6P435 159 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 DUX4L9Q6RFH8 374 aaPredicted RBP12.91□□□□□ -0.34
TRIM13-201ENST00000356017 BIVMQ86UB2 503 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 OR8H2Q8N162 312 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 SLC25A46Q96AG3 418 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 Q96M66 194 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 DUX4Q9UBX2 424 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
TRIM13-201ENST00000356017 LOC105371242A0A075B767 164 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 KIAA1324LA8MWY0 1029 aaPredicted RBP12.9□□□□□ -0.34
TRIM13-201ENST00000356017 SIRPB1O00241 398 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 SLC2A2P11168 524 aaPredicted RBP12.9□□□□□ -0.34
TRIM13-201ENST00000356017 SELLP14151 372 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 GATA3P23771 443 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 ZFP36P26651 326 aaKnown RBP12.9□□□□□ -0.34
TRIM13-201ENST00000356017 SCAND1P57086 179 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 RPS27AP62979 156 aaKnown RBP12.9□□□□□ -0.34
TRIM13-201ENST00000356017 UNC119Q13432 240 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 OR10K2Q6IF99 312 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 GLCCI1Q86VQ1 547 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 PTX4Q96A99 478 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 TMEM186Q96B77 213 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 DMRTB1Q96MA1 342 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 LPAR2Q9HBW0 351 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 RAB22AQ9UL26 194 aa12.9□□□□□ -0.34
TRIM13-201ENST00000356017 SLC33A1O00400 549 aaPredicted RBP12.89□□□□□ -0.35
TRIM13-201ENST00000356017 LDLRAD4O15165 306 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 CD5LO43866 347 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 PSPNO60542 156 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 CSN2P05814 226 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 LIPFP07098 398 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 DVL1P1P54792 670 aaPredicted RBP12.89□□□□□ -0.35
TRIM13-201ENST00000356017 IDNKQ5T6J7 187 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 C17orf107Q6ZR85 190 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 BTN2A1Q7KYR7 527 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 GDPD3Q7L5L3 318 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 TM2D1Q9BX74 207 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 SHARPINQ9H0F6 387 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 DCSTAMPQ9H295 470 aa12.89□□□□□ -0.35
TRIM13-201ENST00000356017 ZNF469Q96JG9 3925 aaPredicted RBP12.89□□□□□ -0.35
TRIM13-201ENST00000356017 TRBV23-1A0A0A0MS06 115 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 TMEM82A0PJX8 343 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 FUOMA2VDF0 154 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 MGST3O14880 152 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 RAB6AP20340 208 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 KCNJ3P48549 501 aa12.88□□□□□ -0.35
TRIM13-201ENST00000356017 RORCP51449 518 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms