RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 OR6A2O95222 327 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 CD8AP01732 235 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 AMBPP02760 352 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 LHX2P50458 406 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 PTTG1IPP53801 180 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 NANOS3P60323 173 aaKnown RBP8.8□□□□□ -1
SYNE1-203ENST00000354674 CSNK2A1P68400 391 aaPredicted RBP8.8□□□□□ -1
SYNE1-203ENST00000354674 ACSM1Q08AH1 577 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 GGTLC2Q14390 218 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 PNLIPRP3Q17RR3 467 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 WDR25Q64LD2 544 aaPredicted RBP8.8□□□□□ -1
SYNE1-203ENST00000354674 ASB10Q8WXI3 467 aa8.8□□□□□ -1
SYNE1-203ENST00000354674 ALKBH3Q96Q83 286 aaPredicted RBP8.8□□□□□ -1
SYNE1-203ENST00000354674 METTL8Q9H825 291 aaKnown RBP8.8□□□□□ -1
SYNE1-203ENST00000354674 MKRN2OSH3BPM6 223 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 CAMLGP49069 296 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 SUCLG1P53597 346 aaKnown RBP8.79□□□□□ -1
SYNE1-203ENST00000354674 RAC3P60763 192 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 HSF1Q00613 529 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 ELOBQ15370 118 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 RHEBQ15382 184 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 RNFT1Q5M7Z0 435 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 TMEM108Q6UXF1 575 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 SSX7Q7RTT5 188 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 ZNF679Q8IYX0 411 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 COMMD1Q8N668 190 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 HSD17B11Q8NBQ5 300 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 PLPP7Q8NBV4 271 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 ZNRF4Q8WWF5 429 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 R3HDM4Q96D70 268 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 RAB39BQ96DA2 213 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 CMBLQ96DG6 245 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 FOXN4Q96NZ1 517 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 OXGR1Q96P68 337 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 ADGRL4Q9HBW9 690 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 FAM166BA8MTA8 275 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 SLC33A1O00400 549 aaPredicted RBP8.79□□□□□ -1
SYNE1-203ENST00000354674 TNFSF11O14788 317 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 GOSR1O95249 250 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 CRHP06850 196 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 CSF1P09603 554 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 MPZP25189 248 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 PPP1CCP36873 323 aaKnown RBP8.79□□□□□ -1
SYNE1-203ENST00000354674 PLA2G5P39877 138 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 PLGLB1Q02325 96 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 RAB32Q13637 225 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 PMS2P11Q13670 270 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 CDK5R1Q15078 307 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 PRSS8Q16651 343 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 TDRG1Q3Y452 100 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 LEG1Q6P5S2 330 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 RTN4RL2Q86UN3 420 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 KLHL13Q9P2N7 655 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 RTTNQ86VV8 2226 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 KIAA1549Q9HCM3 1950 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 GLI4P10075 376 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 ZNF708P17019 499 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 KIR3DL2P43630 455 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 DAP3P51398 398 aaKnown RBP8.79□□□□□ -1
SYNE1-203ENST00000354674 CLDN18P56856 261 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 LINC01590Q5TEZ4 76 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 STAC2Q6ZMT1 411 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 WDFY1Q8IWB7 410 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 SUMF2Q8NBJ7 301 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 FAM46BQ96A09 425 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 SMIM19Q96E16 107 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 RCC1LQ96I51 464 aaKnown RBP8.79□□□□□ -1
SYNE1-203ENST00000354674 SRXN1Q9BYN0 137 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 CNTNAP3Q9BZ76 1288 aa8.79□□□□□ -1
SYNE1-203ENST00000354674 TRAV1-2A0A0B4J238 106 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 TRAV34A0A0B4J273 112 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 PRSS37A4D1T9 235 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 A6NIZ1 184 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 ZNF724A8MTY0 619 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 TRAF3IP2O43734 574 aaPredicted RBP8.78□□□□□ -1
SYNE1-203ENST00000354674 IGHG3P01860 377 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 GAAP10253 952 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 SLC25A4P12235 298 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 RAP1BP61224 184 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 JOSD1Q15040 202 aaPredicted RBP8.78□□□□□ -1
SYNE1-203ENST00000354674 BTNL8Q6UX41 500 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 Q6ZS92 163 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 SLC35D2Q76EJ3 337 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 ZADH2Q8N4Q0 377 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 OR2V1Q8NHB1 315 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 MUCL1Q96DR8 90 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 KCNK17Q96T54 332 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 PHB2Q99623 299 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 TEX13DA0A0J9YY54 714 aaPredicted RBP8.78□□□□□ -1
SYNE1-203ENST00000354674 A0A1B0GUS0 222 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 ZNF736B4DX44 427 aaPredicted RBP8.78□□□□□ -1
SYNE1-203ENST00000354674 VAMP5O95183 116 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 CYB5AP00167 134 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 ELLP55199 621 aaPredicted RBP8.78□□□□□ -1
SYNE1-203ENST00000354674 CHST4Q8NCG5 386 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 OR13C8Q8NGS7 320 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 NOL4LQ96MY1 436 aaPredicted RBP8.78□□□□□ -1
SYNE1-203ENST00000354674 MRI1Q9BV20 369 aa8.78□□□□□ -1
SYNE1-203ENST00000354674 MRPL13Q9BYD1 178 aaKnown RBP8.78□□□□□ -1
SYNE1-203ENST00000354674 SH3BGRL3Q9H299 93 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms