RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ADRA2CP18825 462 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 CD80P33681 288 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 DHRS2Q13268 280 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 VWA1Q6PCB0 445 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 MUC20Q8N307 709 aaPredicted RBP11.94□□□□□ -0.5
SMC6-201ENST00000351948 OR5AP2Q8NGF4 316 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 PSENENQ9NZ42 101 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 LIPGQ9Y5X9 500 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 ESPL1Q14674 2120 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 A0A1W2PPE3 182 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 ZIC3O60481 467 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 SFTPCP11686 197 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 TNFSF10P50591 281 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 RAB13P51153 203 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 WNT2BQ93097 391 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 RNF7Q9UBF6 113 aa11.94□□□□□ -0.5
SMC6-201ENST00000351948 IGKV1D-43A0A0B4J1Z2 117 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 TRAV38-1A0A0B4J264 116 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 hADV38S2A0JD32 116 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 NPIPB9F8W1W9 429 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 J3QT63 122 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 NTN3O00634 580 aaPredicted RBP11.93□□□□□ -0.5
SMC6-201ENST00000351948 C1QBP02746 253 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 GGTLC2Q14390 218 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 P2RY6Q15077 328 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 FAM74A1Q5RGS3 127 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 OR10P1Q8NGE3 313 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 PLSCR3Q9NRY6 295 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 CHATP28329 748 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 TLE4Q04727 773 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 ST3GAL2Q16842 350 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 POC1BQ8TC44 478 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 RNF141Q8WVD5 230 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 C2orf50Q96LR7 162 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 CLEC18AA5D8T8 446 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 SUB1P53999 127 aaKnown RBP eCLIP11.93□□□□□ -0.52e-6■■■■■ 40.2
SMC6-201ENST00000351948 CLEC18CQ8NCF0 446 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 ZNF519Q8TB69 540 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 NPAS1Q99742 590 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 MRPS18AQ9NVS2 196 aaKnown RBP11.93□□□□□ -0.5
SMC6-201ENST00000351948 PURGQ9UJV8 347 aaKnown RBP11.93□□□□□ -0.5
SMC6-201ENST00000351948 DOCK9Q9BZ29 2069 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 DFFBO76075 338 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 ADRA2AP08913 450 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 SRSF6Q13247 344 aaKnown RBP11.93□□□□□ -0.5
SMC6-201ENST00000351948 TMEM104Q8NE00 496 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 ACY3Q96HD9 319 aa11.93□□□□□ -0.5
SMC6-201ENST00000351948 RCL1Q9Y2P8 373 aaKnown RBP11.93□□□□□ -0.5
SMC6-201ENST00000351948 HMGB3O15347 200 aaKnown RBP11.92□□□□□ -0.5
SMC6-201ENST00000351948 CTSSP25774 331 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 LPAR6P43657 344 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 LYPD8Q6UX82 237 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 Q6ZRG5 221 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 ZNRF4Q8WWF5 429 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 OR5AC1P0C628 307 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 FPR2P25090 351 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 ZNF837Q96EG3 531 aaPredicted RBP11.92□□□□□ -0.5
SMC6-201ENST00000351948 MS4A5Q9H3V2 200 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 HIF1ANQ9NWT6 349 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 STRAPQ9Y3F4 350 aaKnown RBP11.92□□□□□ -0.5
SMC6-201ENST00000351948 IGLV3-12A0A075B6K2 115 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 ADAP1O75689 374 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 DTYMKP23919 212 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 ERHP84090 104 aaKnown RBP11.92□□□□□ -0.5
SMC6-201ENST00000351948 SSBP1Q04837 148 aaKnown RBP11.92□□□□□ -0.5
SMC6-201ENST00000351948 GLDNQ6ZMI3 551 aaPredicted RBP11.92□□□□□ -0.5
SMC6-201ENST00000351948 OR5A2Q8NGI9 324 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 OR1K1Q8NGR3 316 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 LINC01560Q8TB33 94 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 ANXA10Q9UJ72 324 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 LSM2Q9Y333 95 aaKnown RBP11.92□□□□□ -0.5
SMC6-201ENST00000351948 SNRPGP15A8MWD9 76 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 LANCL1O43813 399 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 CYTIPO60759 359 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 IFI6P09912 130 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 P2RX3P56373 397 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 FAM27E3Q08E93 113 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 NHLRC1Q6VVB1 395 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 TAAR6Q96RI8 345 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 DEPPQ9NTK1 212 aa11.92□□□□□ -0.5
SMC6-201ENST00000351948 A0A1W2PNV4 684 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 TGM6O95932 706 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 CT45A6P0DMU7 189 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 CT45A5P0DMU8 189 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 CT45A7P0DMV0 189 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 ARL3P36405 182 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 CT45A1Q5HYN5 189 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 AVPI1Q5T686 147 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 LINC01590Q5TEZ4 76 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 CT45A3Q8NHU0 189 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 OR2V2Q96R30 315 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 V9GYH0 126 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 CEBPDP49716 269 aaPredicted RBP11.91□□□□□ -0.5
SMC6-201ENST00000351948 ACOT7LQ6ZUV0 252 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 ADGRG7Q96K78 797 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 ZNF75AQ96N20 296 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 ZNF629Q9UEG4 869 aaPredicted RBP11.91□□□□□ -0.5
SMC6-201ENST00000351948 OR13C7P0DN81 318 aa11.91□□□□□ -0.5
SMC6-201ENST00000351948 CSRP1P21291 193 aaKnown RBP11.91□□□□□ -0.5
SMC6-201ENST00000351948 LAIR2Q6ISS4 152 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms