RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 B4E171 279 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 GSTP1P09211 210 aaKnown RBP11.51□□□□□ -0.57
CASC4-202ENST00000345795 TSPAN7P41732 249 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 FAM3AP98173 230 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 CISD2Q8N5K1 135 aaKnown RBP11.51□□□□□ -0.57
CASC4-202ENST00000345795 OR5M8Q8NGP6 311 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 STOML3Q8TAV4 291 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 SLC26A1Q9H2B4 701 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 SAV1Q9H4B6 383 aaPredicted RBP11.51□□□□□ -0.57
CASC4-202ENST00000345795 ZNF703Q9H7S9 590 aaPredicted RBP11.51□□□□□ -0.57
CASC4-202ENST00000345795 C1orf123Q9NWV4 160 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 NSG2Q9Y328 171 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 WNT9BO14905 357 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 TPT1P13693 172 aaKnown RBP11.51□□□□□ -0.57
CASC4-202ENST00000345795 TAS2R31P59538 309 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 KRBOX4Q5JUW0 171 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 ARPC5LQ9BPX5 153 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 SNRNP70P08621 437 aaKnown RBP11.51□□□□□ -0.57
CASC4-202ENST00000345795 UBBP0CG47 229 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 FUT3P21217 361 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 GGNBP1Q5YKI7 109 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 NSUN5P2Q63ZY6 315 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 TMEM182Q6ZP80 229 aaPredicted RBP11.51□□□□□ -0.57
CASC4-202ENST00000345795 GGNQ86UU5 652 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 CRIM1Q9NZV1 1036 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 PCDHB10Q9UN67 800 aa11.51□□□□□ -0.57
CASC4-202ENST00000345795 TSPAN15O95858 294 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 OR13C7P0DN81 318 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 FUT6P51993 359 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 CLEC12BQ2HXU8 276 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 OR2W3Q7Z3T1 314 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 TMEM123Q8N131 208 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 MRGPRDQ8TDS7 321 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 OCSTAMPQ9BR26 566 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 IGKV1-27A0A075B6S5 117 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 HSPB2A8KAH6 182 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 TSPAN9O75954 239 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 IL5P05113 134 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 ISG15P05161 165 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 ZNF17P17021 662 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 ELLP55199 621 aaPredicted RBP11.5□□□□□ -0.57
CASC4-202ENST00000345795 HSPB2Q16082 182 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 C1orf100Q5SVJ3 147 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 ACOT7LQ6ZUV0 252 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 SLC25A40Q8TBP6 338 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 TAF9BQ9HBM6 251 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 PCDHB16Q9NRJ7 776 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 FAM24AA6NFZ4 105 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 RFPL4AA6NLU0 287 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 RFPL4AL1F8VTS6 287 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 CD63P08962 238 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 ACP1P24666 158 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 RPL12P30050 165 aaKnown RBP11.5□□□□□ -0.57
CASC4-202ENST00000345795 EIF2S3P41091 472 aaKnown RBP11.5□□□□□ -0.57
CASC4-202ENST00000345795 TUSC1Q2TAM9 212 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 LHFPL2Q6ZUX7 228 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 OR10J5Q8NHC4 309 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 APOBEC3DQ96AK3 386 aaPredicted RBP11.5□□□□□ -0.57
CASC4-202ENST00000345795 MLXQ9UH92 298 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 URGCP-MRPS24S4R325 110 aa11.5□□□□□ -0.57
CASC4-202ENST00000345795 IGKV1-12A0A0C4DH73 117 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 IGKV1D-12P01611 117 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 IGFBP3P17936 291 aaPredicted RBP11.49□□□□□ -0.57
CASC4-202ENST00000345795 FHITP49789 147 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 ZADH2Q8N4Q0 377 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 SCARB1Q8WTV0 552 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 AQP3Q92482 292 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 USP9YO00507 2555 aaPredicted RBP11.49□□□□□ -0.57
CASC4-202ENST00000345795 TMEM14DPA8MWL7 114 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 RGS13O14921 159 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 PVALBP20472 110 aaPredicted RBP11.49□□□□□ -0.57
CASC4-202ENST00000345795 FKBP2P26885 142 aaKnown RBP11.49□□□□□ -0.57
CASC4-202ENST00000345795 P2RY4P51582 365 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 SPANXN5Q5MJ07 72 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 FIP1L1Q6UN15 594 aaKnown RBP11.49□□□□□ -0.57
CASC4-202ENST00000345795 TFAP2EQ6VUC0 442 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 GAPTQ8N292 157 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 C2CD4CQ8TF44 421 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 LEAP2Q969E1 77 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 MARS2Q96GW9 593 aaKnown RBP11.49□□□□□ -0.57
CASC4-202ENST00000345795 SLC25A32Q9H2D1 315 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 PUS1Q9Y606 427 aaKnown RBP eCLIP11.49□□□□□ -0.57
CASC4-202ENST00000345795 LOC102723996A0A087X1L8 192 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 ZNF503-AS2A6NEH8 195 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 WIPF3A6NGB9 483 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 PET100P0DJ07 73 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 RPL35P42766 123 aaKnown RBP11.49□□□□□ -0.57
CASC4-202ENST00000345795 AESQ08117 197 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 FAM53AQ6NSI3 398 aaPredicted RBP11.49□□□□□ -0.57
CASC4-202ENST00000345795 LILRB2Q8N423 598 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 ZPBPQ9BS86 351 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 SLC2A9Q9NRM0 540 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 KCNIP1Q9NZI2 227 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 RFNGQ9Y644 331 aa11.49□□□□□ -0.57
CASC4-202ENST00000345795 ZNF716A6NP11 495 aa11.48□□□□□ -0.57
CASC4-202ENST00000345795 SERPINE3A8MV23 424 aa11.48□□□□□ -0.57
CASC4-202ENST00000345795 PDCD6O75340 191 aa11.48□□□□□ -0.57
CASC4-202ENST00000345795 FSTP19883 344 aa11.48□□□□□ -0.57
CASC4-202ENST00000345795 CYCSP99999 105 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms