RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CDAP32320 146 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 UBE2V2Q15819 145 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 OR2C3Q8N628 320 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 CDCA4Q9BXL8 241 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 TMEM38BQ9NVV0 291 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 MYO5AQ9Y4I1 1855 aaKnown RBP11.5□□□□□ -0.57
USP47-202ENST00000339865 APELAP0DMC3 54 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 ZNF385CQ66K41 422 aaPredicted RBP11.5□□□□□ -0.57
USP47-202ENST00000339865 NHLRC1Q6VVB1 395 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 OCIAD1Q9NX40 245 aa11.5□□□□□ -0.57
USP47-202ENST00000339865 K7ESF4 209 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 MPC2O95563 127 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 LGALS7P47929 136 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 DMRTA1Q5VZB9 504 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 PARM1Q6UWI2 310 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 PRNTQ86SH4 94 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 MUC20Q8N307 709 aaPredicted RBP11.49□□□□□ -0.57
USP47-202ENST00000339865 ZDHHC22Q8N966 263 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 FUT6P51993 359 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 C20orf196Q8IYI0 205 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 SMIM4Q8WVI0 70 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 LDLRAD4O15165 306 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 FAM157CP0CG43 387 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 FPR2P25090 351 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 PPP1R1AQ13522 171 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 OR4P4Q8NGL7 312 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 NUDT16L1Q9BRJ7 211 aaKnown RBP11.49□□□□□ -0.57
USP47-202ENST00000339865 FGF21Q9NSA1 209 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 TDRD15B5MCY1 1934 aaKnown RBP11.49□□□□□ -0.57
USP47-202ENST00000339865 C3orf85A0A1B0GTC6 90 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 SOD3P08294 240 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 CDK5R1Q15078 307 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 DEFB124Q8NES8 71 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 PERPQ96FX8 193 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 S1PR5Q9H228 398 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 LEUTXA8MZ59 168 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 SRSF10O75494 262 aaKnown RBP11.49□□□□□ -0.57
USP47-202ENST00000339865 ANKRD55Q3KP44 614 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 GMPPAQ96IJ6 420 aaPredicted RBP11.49□□□□□ -0.57
USP47-202ENST00000339865 ARHGAP5-AS1Q96IT6 56 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 SDF2Q99470 211 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 MED29Q9NX70 200 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 A1L4Q6 167 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 PPP1CCP36873 323 aaKnown RBP11.49□□□□□ -0.57
USP47-202ENST00000339865 PPIAP62937 165 aaKnown RBP11.49□□□□□ -0.57
USP47-202ENST00000339865 FZD2Q14332 565 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 MORN1Q5T089 497 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 SLC35E3Q7Z769 313 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 FAM206AQ9NX38 181 aa11.49□□□□□ -0.57
USP47-202ENST00000339865 IGKV3D-15A0A087WSY6 115 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 IGKV3-15P01624 115 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 OTX1P32242 354 aaPredicted RBP11.48□□□□□ -0.57
USP47-202ENST00000339865 NAAAQ02083 359 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 LIAT1Q6ZQX7 453 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 SLC36A1Q7Z2H8 476 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 RTN4RL1Q86UN2 441 aaPredicted RBP11.48□□□□□ -0.57
USP47-202ENST00000339865 PSMG3Q9BT73 122 aaPredicted RBP11.48□□□□□ -0.57
USP47-202ENST00000339865 VAX2Q9UIW0 290 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 PREX1Q8TCU6 1659 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 DOCK3Q8IZD9 2030 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 SLC25A17O43808 307 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 PDLIM5Q96HC4 596 aaKnown RBP11.48□□□□□ -0.57
USP47-202ENST00000339865 ANGPTL4Q9BY76 406 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 UBE2ZQ9H832 354 aaPredicted RBP11.48□□□□□ -0.57
USP47-202ENST00000339865 ZAR1LA6NP61 321 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 PLPP1O14494 284 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 B4GALT1P15291 398 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 RGS7BPQ6MZT1 257 aaPredicted RBP11.48□□□□□ -0.57
USP47-202ENST00000339865 SNRNP40Q96DI7 357 aaKnown RBP11.48□□□□□ -0.57
USP47-202ENST00000339865 CDC14BO60729 498 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 TIMP1P01033 207 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 ANKRD34AQ69YU3 496 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 ARRDC1Q8N5I2 433 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 IGKV3D-11A0A0A0MRZ8 115 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 NDUFB3O43676 98 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 PF4P02776 101 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 IGKV3-11P04433 115 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 HIST1H1EP10412 219 aaKnown RBP11.48□□□□□ -0.57
USP47-202ENST00000339865 TMEM33P57088 247 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 AGERQ15109 404 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 SLCO4C1Q6ZQN7 724 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 ADAMTS17Q8TE56 1095 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 TAPBPO15533 448 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 FCGR3AP08637 254 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 SSMEM1Q8WWF3 244 aa11.48□□□□□ -0.57
USP47-202ENST00000339865 TRAV1-2A0A0B4J238 106 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 CDX4O14627 284 aaPredicted RBP11.47□□□□□ -0.57
USP47-202ENST00000339865 PNLIPRP2P54317 469 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 LIM2P55344 173 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 OR13C6PQ8NH95 151 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 COA4Q9NYJ1 87 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 RBFOX2O43251 390 aaKnown RBP eCLIP11.47□□□□□ -0.579e-7■■■□□ 18.8
USP47-202ENST00000339865 PDE6DO43924 150 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 CRHP06850 196 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 INHBBP09529 407 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 LPAR6P43657 344 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 KCNAB1Q14722 419 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 ZNF766Q5HY98 468 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 SAPCD1Q5SSQ6 148 aa11.47□□□□□ -0.57
USP47-202ENST00000339865 RFESDQ8TAC1 157 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms