RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 TMED7-TICAM2A0A0A6YYA0 188 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 A8MV72 311 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 CTNSO60931 367 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 KLK1P06870 262 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 HLA-GP17693 338 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 OR8G2PQ6IF36 304 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ZDHHC24Q6UX98 284 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TOMM40LQ969M1 308 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 PTDSS2Q9BVG9 487 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 C1QTNF6Q9BXI9 259 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 S1PR5Q9H228 398 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ADGRL4Q9HBW9 690 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 UQCR10Q9UDW1 63 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TIMM10BQ9Y5J6 103 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TCRBV7S2A1N4TA0A589 114 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 MFSD2BA6NFX1 497 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 IQCF5A8MTL0 148 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 RAB27BO00194 218 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SLC17A2O00624 439 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ACVR1BP36896 505 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ZXDBP98169 803 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM217Q8N7C4 229 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF740Q8NDX6 193 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 NUBPLQ8TB37 319 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 FAM3DQ96BQ1 224 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 PRDM14Q9GZV8 571 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 SIRT3Q9NTG7 399 aaPredicted RBP2.94□□□□□ -1.94
CSMD3-202ENST00000339701 HIF1ANQ9NWT6 349 aa2.94□□□□□ -1.94
CSMD3-202ENST00000339701 IFITM5A6NNB3 132 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 PPBPP02775 128 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 FGF3P11487 239 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ARRB2P32121 409 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 DRD3P35462 400 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 MEF2CQ06413 473 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 DUSP8Q13202 625 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SIRPB2Q5JXA9 342 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ADAMTSL4Q6UY14 1074 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CADM3Q8N126 398 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR4D6Q8NGJ1 314 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR4S2Q8NH73 311 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ERGIC1Q969X5 290 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 C2orf50Q96LR7 162 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GGACTQ9BVM4 153 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 NMES1Q9C002 83 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 C11orf68Q9H3H3 251 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LHX9Q9NQ69 397 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CACNG4Q9UBN1 327 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 PILRBQ9UKJ0 227 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CES1P1Q9UKY3 287 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 PLAGL1Q9UM63 463 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TCF21O43680 179 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LMX1BO60663 402 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 FBXO24O75426 580 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 FOXH1O75593 365 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 HIST1H1CP16403 213 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 FCARP24071 287 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 MC5RP33032 325 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GDNFP39905 211 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GPR4P46093 362 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LSM6P62312 80 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 KCNJ10P78508 379 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 DEFB110Q30KQ9 67 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CLEC6AQ6EIG7 209 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SHISA5Q8N114 240 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 MORN4Q8NDC4 146 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR52E2Q8NGJ4 325 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 NARFLQ9H6Q4 476 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SMPXQ9UHP9 88 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LOC102723971A0A1B0GUV8 181 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SAP18O00422 153 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 MFNGO00587 321 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CPMP14384 443 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 P2RX3P56373 397 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LINC01545Q5VT33 79 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 FDX2Q6P4F2 183 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SFTPA2Q8IWL1 248 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SFTPA1Q8IWL2 248 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 C17orf78Q8N4C9 275 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GRHL3Q8TE85 626 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR4C12Q96R67 309 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 NUDT22Q9BRQ3 303 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM38BQ9NVV0 291 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 PEF1Q9UBV8 284 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 WSB1Q9Y6I7 421 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TRAV6A0A075B6T7 132 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 NIPSNAP2O75323 286 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SOX14O95416 240 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GABRG2P18507 467 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 RPL12P30050 165 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SUCLG1P53597 346 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 DLX1P56177 255 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 HIST1H1AQ02539 215 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 KCNMB1Q16558 191 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TOR2AQ5JU69 321 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 NCBP2-AS2Q69YL0 99 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 APOOLQ6UXV4 268 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ATOH7Q8N100 152 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM130Q8N3G9 435 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 DUSP18Q8NEJ0 188 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms