RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CALHM2Q9HA72 323 aa12.34□□□□□ -0.43
PCDH8-201ENST00000338862 PPP1R3CQ9UQK1 317 aa12.34□□□□□ -0.43
PCDH8-201ENST00000338862 CCDC187A0A096LP49 1063 aa12.34□□□□□ -0.43
PCDH8-201ENST00000338862 A0A1W2PQD3 144 aa12.34□□□□□ -0.43
PCDH8-201ENST00000338862 CXCL13O43927 109 aa12.34□□□□□ -0.43
PCDH8-201ENST00000338862 ARL6IP1Q15041 203 aa12.34□□□□□ -0.43
PCDH8-201ENST00000338862 FRZBQ92765 325 aa12.34□□□□□ -0.43
PCDH8-201ENST00000338862 MARS2Q96GW9 593 aaKnown RBP12.34□□□□□ -0.43
PCDH8-201ENST00000338862 MRGPRX4Q96LA9 322 aa12.34□□□□□ -0.43
PCDH8-201ENST00000338862 MOB1AQ9H8S9 216 aa12.34□□□□□ -0.43
PCDH8-201ENST00000338862 CLEC1BQ9P126 229 aa12.34□□□□□ -0.43
PCDH8-201ENST00000338862 KLK3P07288 261 aaPredicted RBP12.33□□□□□ -0.44
PCDH8-201ENST00000338862 RNF224P0DH78 156 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF32P17041 273 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 HAAOP46952 286 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF266Q14584 549 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 SPANXN5Q5MJ07 72 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 OSR2Q8N2R0 312 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF610Q8N9Z0 462 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 PLPPR2Q96GM1 343 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 THOC3Q96J01 351 aaKnown RBP12.33□□□□□ -0.44
PCDH8-201ENST00000338862 DENND4AQ7Z401 1863 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 A0A1B0GTQ1 180 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 LILRA5A6NI73 299 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 TRAF3IP2O43734 574 aaPredicted RBP12.33□□□□□ -0.44
PCDH8-201ENST00000338862 CTSDP07339 412 aaPredicted RBP12.33□□□□□ -0.44
PCDH8-201ENST00000338862 HLA-GP17693 338 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 SPEM2Q0P670 501 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 CNN3Q15417 329 aaKnown RBP12.33□□□□□ -0.44
PCDH8-201ENST00000338862 BATFQ16520 125 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 CDPF1Q6NVV7 123 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 DPPA2Q7Z7J5 298 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 MAML2Q8IZL2 1156 aaPredicted RBP12.33□□□□□ -0.44
PCDH8-201ENST00000338862 OR1K1Q8NGR3 316 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 SHDQ96IW2 340 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 BCO1Q9HAY6 547 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 TMEM100Q9NV29 134 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 PLA2G2EQ9NZK7 142 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 B3GAT1Q9P2W7 334 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 PTPRZ1P23471 2315 aaPredicted RBP12.33□□□□□ -0.44
PCDH8-201ENST00000338862 EP300Q09472 2414 aaPredicted RBP12.33□□□□□ -0.44
PCDH8-201ENST00000338862 DBX1A6NMT0 343 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 WDR1O75083 606 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 GALNSP34059 522 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 LPAL2Q16609 132 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 LTC4SQ16873 150 aa12.33□□□□□ -0.44
PCDH8-201ENST00000338862 IGHV1OR15-9A0A0B4J2B8 117 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 LOC390937A0A1W2PQ73 354 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 SMCO3A2RU48 225 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 CHST1O43916 411 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 METTL15P1P0C7V9 234 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 HNF1AP20823 631 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF133P52736 654 aaPredicted RBP12.32□□□□□ -0.44
PCDH8-201ENST00000338862 S100A12P80511 92 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 QRFPP83859 136 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 PLPPR5Q32ZL2 321 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 PHYHD1Q5SRE7 291 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 TCEAL6Q6IPX3 200 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 TP53RKQ96S44 253 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF318Q5VUA4 2279 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF816-ZNF321PA0A0X1KG74 233 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 PMP22Q01453 160 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.32□□□□□ -0.44
PCDH8-201ENST00000338862 WDR25Q64LD2 544 aaPredicted RBP12.32□□□□□ -0.44
PCDH8-201ENST00000338862 GUSBP11Q6P575 273 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 LYZL4Q96KX0 146 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 RASL10BQ96S79 203 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 RSG1Q9BU20 258 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 SLC7A10Q9NS82 523 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 C5orf52A6NGY3 159 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 EIF1BO60739 113 aaKnown RBP12.32□□□□□ -0.44
PCDH8-201ENST00000338862 CYTIPO60759 359 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 PIAS2O75928 621 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 OR8U8P0C7N1 319 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 TCN2P20062 427 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 EIF1P41567 113 aaKnown RBP12.32□□□□□ -0.44
PCDH8-201ENST00000338862 GPM6AP51674 278 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 RND3P61587 244 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 CEACAM16Q2WEN9 425 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 LIAT1Q6ZQX7 453 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 TMEM37Q8WXS4 190 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF488Q96MN9 340 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 CABLES2Q9BTV7 478 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 OR51M1Q9H341 326 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 C19orf25Q9UFG5 118 aaPredicted RBP12.32□□□□□ -0.44
PCDH8-201ENST00000338862 RNF150Q9ULK6 438 aa12.32□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF587BE7ETH6 402 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 BCAT2O15382 392 aaPredicted RBP12.31□□□□□ -0.44
PCDH8-201ENST00000338862 NR2C1P13056 603 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 NPBWR2P48146 333 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 CCR5P51681 352 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 IGFBP7Q16270 282 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 NSUN5P2Q63ZY6 315 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 TBC1D26Q86UD7 250 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 GAPTQ8N292 157 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 MVB12AQ96EY5 273 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 SLC25A31Q9H0C2 315 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 CCL28Q9NRJ3 127 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 A0A1B0GV90 55 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms