RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 SRSF6Q13247 344 aaKnown RBP12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 TMEM211Q6ICI0 200 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 GLRX5Q86SX6 157 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 SLC30A7Q8NEW0 376 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 OR5L1Q8NGL2 311 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 SLC2A9Q9NRM0 540 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 ASF1BQ9NVP2 202 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 PCDHB10Q9UN67 800 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 ESPL1Q14674 2120 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 TRGV5A0A0B4J1U4 118 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 CD300LBA8K4G0 201 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 C3orf80F5H4A9 247 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 SYNGR1O43759 233 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 CST4P01036 141 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 Q8NFD4 153 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 OR5T2Q8NGG2 359 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 CNTNAP3BQ96NU0 1288 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 CNTNAP3Q9BZ76 1288 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 DNTTIP1Q9H147 329 aa12.76□□□□□ -0.37
CLCNKA-201ENST00000331433 SLC22A20A6NK97 555 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 IFNA21P01568 189 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 AADACP22760 399 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 CLN3Q13286 438 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 TMEM187Q14656 261 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 IGFBP7Q16270 282 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 OR2A2Q6IF42 318 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 MOB3AQ96BX8 217 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 SLC5A7Q9GZV3 580 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 KCNIP3Q9Y2W7 256 aa12.75□□□□□ -0.37
CLCNKA-201ENST00000331433 SCGB1D2O95969 90 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 APLNRP35414 380 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 GLP1RP43220 463 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 FGF12P61328 243 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 NAAAQ02083 359 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 SPATA46Q5T0L3 261 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 OR1K1Q8NGR3 316 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 ZNF488Q96MN9 340 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 LSM5Q9Y4Y9 91 aaKnown RBP12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 APOC3P02656 99 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 HKR1P10072 659 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 FBXW9Q5XUX1 488 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 HAGHLQ6PII5 290 aaPredicted RBP12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 LYZL2Q7Z4W2 148 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 MDP1Q86V88 176 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 SPERTQ8NA61 448 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 ZC4H2Q9NQZ6 224 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 DNAJB11Q9UBS4 358 aa12.74□□□□□ -0.37
CLCNKA-201ENST00000331433 TRAPPC2LH3BP13 241 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 NKX2-8O15522 239 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 FGF16O43320 207 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 NOVA1P51513 510 aaKnown RBP12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 HERV-K104P61576 105 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 BPIFCQ8NFQ6 507 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 BCL2L2Q92843 193 aaPredicted RBP12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 GALNT14Q96FL9 552 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 NARS2Q96I59 477 aaKnown RBP12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 HIST1H2AAQ96QV6 131 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 TUBD1Q9UJT1 453 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 A0A1W2PR80 420 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 PPYP01298 95 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 IL32P24001 234 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 ARHGDIBP52566 201 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 TSC22D1Q15714 1073 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 RPL7L1Q6DKI1 246 aaKnown RBP12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 OR2T2Q6IF00 324 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 TFAP2EQ6VUC0 442 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 DEFB124Q8NES8 71 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 OR5A2Q8NGI9 324 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 GLYATL2Q8WU03 294 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 ZDHHC11Q9H8X9 412 aa12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 DSPP15924 2871 aaKnown RBP12.73□□□□□ -0.37
CLCNKA-201ENST00000331433 SPAARA0A1B0GVQ0 90 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A10PA6NDY2 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A18PA6NE21 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A16PA6NEW6 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A20PA6NIJ5 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A8PA6NJQ4 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A7PA6NKC0 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A22PA8MWA6 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A12PA8MX19 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A5PA8MXJ8 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A23PA8MXZ1 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 BET1O15155 118 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 LRP3O75074 770 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 DEDDO75618 318 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A15PP0C7V4 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A13PP0C7W8 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A14PP0C7W9 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 FAM90A24PP0C7X0 464 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 PRKACAP17612 351 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 RCC1P18754 421 aaPredicted RBP12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 PMELP40967 661 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 TNFSF10P50591 281 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 AKR1C2P52895 323 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 AKR1C1Q04828 323 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 ATRAIDQ6UW56 229 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 MYPOPQ86VE0 399 aaPredicted RBP12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
CLCNKA-201ENST00000331433 TMEM178AQ8NBL3 297 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms