RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 LPCAT3Q6P1A2 487 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 Q6ZTK2 550 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 C11orf53Q8IXP5 236 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 GDPD1Q8N9F7 314 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 SLC25A28Q96A46 364 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 TMEM246Q9BRR3 403 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 DPCDQ9BVM2 203 aaPredicted RBP4.33□□□□□ -1.72
LRIT3-201ENST00000327908 RBM38Q9H0Z9 239 aaKnown RBP4.33□□□□□ -1.72
LRIT3-201ENST00000327908 ATG5Q9H1Y0 275 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 TMEM165Q9HC07 324 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 IFT46Q9NQC8 304 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CACFD1Q9UGQ2 172 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 TMEM272A0A1B0GTI8 110 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 A6NHS1 94 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 H0YL77 283 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CD5LO43866 347 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 OR7C1O76099 320 aaPredicted RBP4.33□□□□□ -1.72
LRIT3-201ENST00000327908 WNT2P09544 360 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 VSIG8P0DPA2 414 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 HIST1H1DP16402 221 aaKnown RBP4.33□□□□□ -1.72
LRIT3-201ENST00000327908 GABRR1P24046 479 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CHATP28329 748 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 ETV6P41212 452 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 OR3A4PP47883 348 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 INPP1P49441 399 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 PRRX1P54821 245 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 ARFRP1Q13795 201 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 SNTB1Q13884 538 aaKnown RBP4.33□□□□□ -1.72
LRIT3-201ENST00000327908 GRK1Q15835 563 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CR1LQ2VPA4 569 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 TMEM69Q5SWH9 247 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CCDC144NLQ6NUI1 221 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 GAPTQ8N292 157 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 ASCC1Q8N9N2 400 aaKnown RBP4.33□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.33□□□□□ -1.72
LRIT3-201ENST00000327908 TMEM185AQ8NFB2 350 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 OR5T2Q8NGG2 359 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 OR4A4PQ8NGN8 299 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 OR13C5Q8NGS8 318 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF596Q8TC21 504 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 PPP1R14AQ96A00 147 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CMSS1Q9BQ75 279 aaKnown RBP4.33□□□□□ -1.72
LRIT3-201ENST00000327908 AIFM2Q9BRQ8 373 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 CCDC32Q9BV29 185 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 UNKLQ9H9P5 680 aaKnown RBP4.33□□□□□ -1.72
LRIT3-201ENST00000327908 MTCH1Q9NZJ7 389 aa4.33□□□□□ -1.72
LRIT3-201ENST00000327908 A0A0A6YYJ9 748 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 CENPXA8MT69 81 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 TNFRSF13BO14836 293 aaPredicted RBP4.32□□□□□ -1.72
LRIT3-201ENST00000327908 GSTZ1O43708 216 aaPredicted RBP4.32□□□□□ -1.72
LRIT3-201ENST00000327908 SYNGR1O43759 233 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 TK1P04183 234 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 CSF1P09603 554 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 ADRA2CP18825 462 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 BLVRBP30043 206 aaPredicted RBP4.32□□□□□ -1.72
LRIT3-201ENST00000327908 PRSS3P35030 304 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 QRFPP83859 136 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 CBX3Q13185 183 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 ZNF846Q147U1 533 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 HES5Q5TA89 166 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 MINOS1Q5TGZ0 78 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 WDR25Q64LD2 544 aaPredicted RBP4.32□□□□□ -1.72
LRIT3-201ENST00000327908 TCTEX1D1Q8N7M0 179 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 ZBTB34Q8NCN2 500 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 LGALS14Q8TCE9 139 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 ADTRPQ96IZ2 230 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 GAFA1Q96PS6 74 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 DCTN5Q9BTE1 182 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 LINC00574Q9H8X3 128 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 JPT1Q9UK76 154 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 TBL2Q9Y4P3 447 aaKnown RBP4.32□□□□□ -1.72
LRIT3-201ENST00000327908 MINOS1-NBL1R4GNA1 71 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 DOPEY1Q5JWR5 2465 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 IGHV2-70DA0A0C4DH43 119 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 A0A1W2PQ09 198 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 NPIPB11E5RHQ5 1161 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 OR2H2O95918 312 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 MSMBP08118 114 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 CD34P28906 385 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 AANATQ16613 207 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 ATAD3CQ5T2N8 411 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 METTL11BQ5VVY1 283 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 ASPHD2Q6ICH7 369 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 Q6P435 159 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 WDR86Q86TI4 376 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 BOLLQ8N9W6 283 aaKnown RBP4.32□□□□□ -1.72
LRIT3-201ENST00000327908 CLDND2Q8NHS1 167 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 LPAR5Q9H1C0 372 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 PALMDQ9NP74 551 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 SESN1Q9Y6P5 492 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 HIVEP3Q5T1R4 2406 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 RFPL4AA6NLU0 287 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 RNF212BA8MTL3 300 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 RFPL4AL1F8VTS6 287 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 ST8SIA5O15466 376 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 CYB5R3P00387 301 aaPredicted RBP4.32□□□□□ -1.72
LRIT3-201ENST00000327908 NDUFB7P17568 137 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 COL8A2P25067 703 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 DEFA1P59665 94 aa4.32□□□□□ -1.72
LRIT3-201ENST00000327908 DEFA3P59666 94 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms