RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 RBPMS2Q6ZRY4 209 aaKnown RBP15.04■□□□□ -0
SMCHD1-201ENST00000320876 ZNF107Q9UII5 783 aaPredicted RBP15.04■□□□□ -0
SMCHD1-201ENST00000320876 SIGLEC7Q9Y286 467 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 NACAE9PAV3 2078 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 ARG1P05089 322 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 ALKBH6Q3KRA9 238 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 WDR31Q8NA23 367 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 OR2V1Q8NHB1 315 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 MBNL1Q9NR56 388 aaKnown RBP15.04■□□□□ -0
SMCHD1-201ENST00000320876 CTDSPLO15194 276 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 OR3A4PP47883 348 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 CLDN18P56856 261 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 MYOZ3Q8TDC0 251 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 HSD17B10Q99714 261 aaKnown RBP15.04■□□□□ -0
SMCHD1-201ENST00000320876 LINC00615Q96LM1 132 aaPredicted RBP15.04■□□□□ -0
SMCHD1-201ENST00000320876 FGF22Q9HCT0 170 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 KCNE3Q9Y6H6 103 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 K7ESF4 209 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 CYR61O00622 381 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 ZNF253O75346 499 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 CEBPDP49716 269 aaPredicted RBP15.04■□□□□ -0
SMCHD1-201ENST00000320876 ZNF141Q15928 474 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 ZNF547Q8IVP9 402 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 OR2D3Q8NGH3 330 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 C6orf201Q7Z4U5 140 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 OR4S2Q8NH73 311 aa15.04■□□□□ -0
SMCHD1-201ENST00000320876 ANKRD20A5PA0PJZ0 165 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 EPPINO95925 133 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 OR8A1Q8NGG7 326 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 WFDC5Q8TCV5 224 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 MMP25Q9NPA2 562 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 FUT9Q9Y231 359 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 DNASE2O00115 360 aaPredicted RBP15.03■□□□□ -0
SMCHD1-201ENST00000320876 NGFP01138 241 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 TCF21O43680 179 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 CXorf1O96002 111 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 FABP2P12104 132 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 DLX1P56177 255 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 CD300LDQ6UXZ3 194 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 TGIF2LYQ8IUE0 185 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 GABRA1P14867 456 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 CD40P25942 277 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 GAMTQ14353 236 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 ZNF345Q14585 488 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 UBE2V2Q15819 145 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 LYG1Q8N1E2 194 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 MEGF10Q96KG7 1140 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 ZNF77Q15935 545 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 ARID2Q68CP9 1835 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 PARP14Q460N5 1801 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 HIST1H1BP16401 226 aaKnown RBP15.03■□□□□ -0
SMCHD1-201ENST00000320876 ZNF260Q3ZCT1 412 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 OR4C3Q8NH37 302 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 VN1R17PQ8TDU5 208 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 OR4C46A6NHA9 309 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 RPEQ96AT9 228 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 PRDM7Q9NQW5 492 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 MARCH5Q9NX47 278 aa15.03■□□□□ -0
SMCHD1-201ENST00000320876 CBLN2Q8IUK8 224 aa15.02■□□□□ -0
SMCHD1-201ENST00000320876 ZDHHC16Q969W1 377 aa15.02■□□□□ -0
SMCHD1-201ENST00000320876 PSG11Q9UQ72 335 aa15.02■□□□□ -0
SMCHD1-201ENST00000320876 BRS3P32247 399 aa15.02■□□□□ -0
SMCHD1-201ENST00000320876 SLC35E3Q7Z769 313 aa15.02■□□□□ -0
SMCHD1-201ENST00000320876 RPS4Y2Q8TD47 263 aa15.02■□□□□ -0
SMCHD1-201ENST00000320876 C9orf62Q8N4C0 152 aa15.02■□□□□ -0
SMCHD1-201ENST00000320876 ST6GAL1P15907 406 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 LYZP61626 148 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 TMEM208Q9BTX3 173 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 MFSD2BA6NFX1 497 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 CSN3P07498 182 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 ORM2P19652 201 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 DIRC3C9JPN6 131 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 H0Y8X5 98 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 DHHO43323 396 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 SRP14P37108 136 aaKnown RBP15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 GPR3P46089 330 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 FOXF1Q12946 379 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 CEACAM16Q2WEN9 425 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 ANKRD55Q3KP44 614 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 SEZ6L2Q6UXD5 910 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 TNFRSF12AQ9NP84 129 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 STARD10Q9Y365 291 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 GBF1Q92538 1859 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 TRDCB7Z8K6 153 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 HIST1H1EP10412 219 aaKnown RBP15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 DEGS2Q6QHC5 323 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 TUSC5Q8IXB3 177 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 SMDT1Q9H4I9 107 aa15.02□□□□□ -0.01
SMCHD1-201ENST00000320876 PCMT1P22061 227 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 HOXA6P31267 233 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 SELENOPP49908 381 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 C8orf44Q96CB5 159 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 IL17BQ9UHF5 180 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 FXYD1O00168 92 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 PDCD6O75340 191 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 GNG10P50151 68 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 SMAGPQ0VAQ4 97 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 ISOC2Q96AB3 205 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 TMEM204Q9BSN7 226 aa15.01□□□□□ -0.01
SMCHD1-201ENST00000320876 CLEC5AQ9NY25 188 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms