RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 CDH20Q9HBT6 801 aa13.67□□□□□ -0.22
SHISA2-201ENST00000319420 ZNF71Q9NQZ8 489 aaPredicted RBP13.67□□□□□ -0.22
SHISA2-201ENST00000319420 TRAV39A0A0B4J263 110 aa13.67□□□□□ -0.22
SHISA2-201ENST00000319420 DUS4LO95620 317 aaKnown RBP13.67□□□□□ -0.22
SHISA2-201ENST00000319420 RPA2P15927 270 aa13.67□□□□□ -0.22
SHISA2-201ENST00000319420 HOXC12P31275 282 aa13.67□□□□□ -0.22
SHISA2-201ENST00000319420 KIR2DL2P43627 348 aaPredicted RBP13.67□□□□□ -0.22
SHISA2-201ENST00000319420 SUPT4H1P63272 117 aaKnown RBP13.67□□□□□ -0.22
SHISA2-201ENST00000319420 ZNF169Q14929 603 aaPredicted RBP13.67□□□□□ -0.22
SHISA2-201ENST00000319420 SP6Q3SY56 376 aa13.67□□□□□ -0.22
SHISA2-201ENST00000319420 PHLDA2Q53GA4 152 aa13.67□□□□□ -0.22
SHISA2-201ENST00000319420 GALNT11Q8NCW6 608 aa13.67□□□□□ -0.22
SHISA2-201ENST00000319420 NANOS1Q8WY41 292 aaKnown RBP13.67□□□□□ -0.22
SHISA2-201ENST00000319420 RLN2P04090 185 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 C4BPBP20851 252 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 SERPINF1P36955 418 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 RBM11P57052 281 aaKnown RBP13.66□□□□□ -0.22
SHISA2-201ENST00000319420 TAS2R46P59540 309 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 TBC1D28Q2M2D7 210 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 C11orf87Q6NUJ2 197 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 CLEC18BQ6UXF7 455 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 ZNF610Q8N9Z0 462 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 SARAFQ96BY9 339 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 ANXA10Q9UJ72 324 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 BET1O15155 118 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 FCGR3AP08637 254 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 NMBP08949 121 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 RRASP10301 218 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 NBL1P41271 181 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 SRSF4Q08170 494 aaKnown RBP13.66□□□□□ -0.22
SHISA2-201ENST00000319420 TMEM65Q6PI78 240 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 OVCH2Q7RTZ1 564 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 LHFPL1Q86WI0 220 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 ARRDC1Q8N5I2 433 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 RELL2Q8NC24 303 aaPredicted RBP13.66□□□□□ -0.22
SHISA2-201ENST00000319420 METTL8Q9H825 291 aaKnown RBP13.66□□□□□ -0.22
SHISA2-201ENST00000319420 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.66□□□□□ -0.22
SHISA2-201ENST00000319420 COMMD9Q9P000 198 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 OSGIN2Q9Y236 505 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 PLCE1Q9P212 2302 aa13.66□□□□□ -0.22
SHISA2-201ENST00000319420 TRAPPC2LH3BP13 241 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 GRPP07492 148 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 PTGER4P35408 488 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 EIF2S3P41091 472 aaKnown RBP13.65□□□□□ -0.22
SHISA2-201ENST00000319420 AANATQ16613 207 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 CEACAM21Q3KPI0 293 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 TMEM128Q5BJH2 165 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 PRR18Q8N4B5 295 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 CCDC54Q8NEL0 328 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 OR1J1Q8NGS3 322 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 TEX13DA0A0J9YY54 714 aaPredicted RBP13.65□□□□□ -0.22
SHISA2-201ENST00000319420 PQLC2LA1A4F0 135 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 RNF222A6NCQ9 220 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 DBX1A6NMT0 343 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 IGHG3P01860 377 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 HLA-GP17693 338 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 FABP6P51161 128 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 ANKRD55Q3KP44 614 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 ZNF175Q9Y473 711 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 PKDREJQ9NTG1 2253 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 FAHD2BQ6P2I3 314 aaPredicted RBP13.65□□□□□ -0.22
SHISA2-201ENST00000319420 Q6ZPA2 131 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 SLC25A40Q8TBP6 338 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 FAHD2AQ96GK7 314 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 ZC4H2Q9NQZ6 224 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 TNFSF18Q9UNG2 199 aa13.65□□□□□ -0.22
SHISA2-201ENST00000319420 SS18L1O75177 396 aaPredicted RBP13.64□□□□□ -0.23
SHISA2-201ENST00000319420 PDCD6O75340 191 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 CALCRP30988 508 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 FCGR2CP31995 323 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 PPP1CBP62140 327 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 FAM74A1Q5RGS3 127 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 EXTL1Q92935 676 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 ZNF75AQ96N20 296 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 MBD2Q9UBB5 411 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 H0YL77 283 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 ACSF3Q4G176 576 aaPredicted RBP13.64□□□□□ -0.23
SHISA2-201ENST00000319420 ACTBL2Q562R1 376 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 IGFL2Q6UWQ7 119 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 PEG10Q86TG7 708 aaKnown RBP13.64□□□□□ -0.23
SHISA2-201ENST00000319420 OR6K3Q8NGY3 331 aa13.64□□□□□ -0.23
SHISA2-201ENST00000319420 VRK1Q99986 396 aaPredicted RBP13.64□□□□□ -0.23
SHISA2-201ENST00000319420 CEACAM18A8MTB9 384 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 FUT3P21217 361 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 DAZAP2Q15038 168 aaPredicted RBP13.63□□□□□ -0.23
SHISA2-201ENST00000319420 GABRA6Q16445 453 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 PLEKHN1Q494U1 663 aaPredicted RBP13.63□□□□□ -0.23
SHISA2-201ENST00000319420 FAM209BQ5JX69 171 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 RGS7BPQ6MZT1 257 aaPredicted RBP13.63□□□□□ -0.23
SHISA2-201ENST00000319420 LPCAT3Q6P1A2 487 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 Q6ZT83 130 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 MKXQ8IYA7 352 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 TMEM185AQ8NFB2 350 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 SCARB1Q8WTV0 552 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 TINAGQ9UJW2 476 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 C14orf166Q9Y224 244 aaKnown RBP13.63□□□□□ -0.23
SHISA2-201ENST00000319420 CDIPTO14735 213 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 WDR1O75083 606 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 SFT2D2O95562 160 aa13.63□□□□□ -0.23
SHISA2-201ENST00000319420 TFF1P04155 84 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms