RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 TMEM50BP56557 158 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 RAB12Q6IQ22 244 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 Q6ZTK2 550 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 PEG10Q86TG7 708 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 OR56B1Q8NGI3 324 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 RAB3CQ96E17 227 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 HDHD3Q9BSH5 251 aaPredicted RBP12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 ABCG5Q9H222 651 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 CHODLQ9H9P2 273 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 DLL4Q9NR61 685 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 ADAM30Q9UKF2 790 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 AMY2BP19961 511 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 DNASE1P24855 282 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 CFHR2P36980 270 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 TAS2R20P59543 309 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 GUCA2AQ02747 115 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 EDDM3AQ14507 147 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 SPANXN2Q5MJ10 180 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 TMEM185AQ8NFB2 350 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 NEDD4LQ96PU5 975 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 TMEM246Q9BRR3 403 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 DIABLOQ9NR28 239 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 TRAV24A0A0B4J272 114 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 SH2D1BO14796 132 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 GPR6P46095 362 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 SCAND1P57086 179 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 ZNF146Q15072 292 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 CDNFQ49AH0 187 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 CDH24Q86UP0 819 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 SUMF2Q8NBJ7 301 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 ANGPTL6Q8NI99 470 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 NUDCD2Q8WVJ2 157 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 RAB40AQ8WXH6 277 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 MRPS24Q96EL2 167 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 TSC22D3Q99576 134 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 SULT4A1Q9BR01 284 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 TM2D1Q9BX74 207 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 TMEM165Q9HC07 324 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 KCNK7Q9Y2U2 307 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 A3GALT2U3KPV4 340 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 V9GYH0 126 aa12.87□□□□□ -0.35
PDLIM5-202ENST00000318007 CCDC168Q8NDH2 2452 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 TRAV38-1A0A0B4J264 116 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 MEIOCA2RUB1 952 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 J3QRK9 145 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 SLC33A1O00400 549 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 ADAM20O43506 726 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 KNG1P01042 644 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 PAN3Q58A45 887 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 SPIN3Q5JUX0 258 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 STUMQ69YW2 141 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 Q6P435 159 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 CCDC190Q86UF4 302 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 Q8NFD4 153 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 MAFIPQ8WZ33 124 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 PTX4Q96A99 478 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 TIMD4Q96H15 378 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 LURAP1Q96LR2 239 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 ABHD1Q96SE0 405 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 PECRQ9BY49 303 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 AUNIPQ9H7T9 357 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 ZNF701Q9NV72 531 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 FBLN5Q9UBX5 448 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 MAB21L2Q9Y586 359 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 AKAP9Q99996 3911 aa12.86□□□□□ -0.35
PDLIM5-202ENST00000318007 TRAV39A0A0B4J263 110 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 LGALS8O00214 317 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 XRCC3O43542 346 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 SEC61A1P61619 476 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 PYDC2Q56P42 97 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 TEX36Q5VZQ5 186 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 FAM168AQ92567 244 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 WDFY2Q96P53 400 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 DPCDQ9BVM2 203 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 RASL12Q9NYN1 266 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 GLS2Q9UI32 602 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 IGHV4-30-2A0A087WSY4 118 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 TMEM127O75204 238 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 PDCD6O75340 191 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 IGHV2-70P01814 119 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 ACAA1P09110 424 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 MUC1P15941 1255 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 HIST1H1DP16402 221 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 CHATP28329 748 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 MNDAP41218 407 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 AESQ08117 197 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 ZNF79Q15937 498 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 CLEC2AQ6UVW9 174 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 FAM89BQ8N5H3 189 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 RAB1CQ92928 201 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 GAFA1Q96PS6 74 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 CTSZQ9UBR2 303 aa12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 ZNF230Q9UIE0 474 aaPredicted RBP12.85□□□□□ -0.35
PDLIM5-202ENST00000318007 NOTCH2Q04721 2471 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 TMEM82A0PJX8 343 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 CEACAM18A8MTB9 384 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 HLA-DQB1P01920 261 aa12.84□□□□□ -0.35
PDLIM5-202ENST00000318007 FUT3P21217 361 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms