RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 PIGYQ3MUY2 71 aa12.88□□□□□ -0.35
CHFR-202ENST00000315585 C10orf91Q5T1B1 145 aa12.88□□□□□ -0.35
CHFR-202ENST00000315585 TSPO2Q5TGU0 170 aa12.88□□□□□ -0.35
CHFR-202ENST00000315585 CTRB2Q6GPI1 263 aa12.88□□□□□ -0.35
CHFR-202ENST00000315585 ZNF611Q8N823 705 aa12.88□□□□□ -0.35
CHFR-202ENST00000315585 APOBEC3DQ96AK3 386 aaPredicted RBP12.88□□□□□ -0.35
CHFR-202ENST00000315585 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
CHFR-202ENST00000315585 PARP11Q9NR21 331 aa12.88□□□□□ -0.35
CHFR-202ENST00000315585 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
CHFR-202ENST00000315585 OR7C1O76099 320 aaPredicted RBP12.87□□□□□ -0.35
CHFR-202ENST00000315585 CTXN2P0C2S0 81 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 CAV2P51636 162 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 F2RL1P55085 397 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 IL13RA2Q14627 380 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 TMPRSS7Q7RTY8 843 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 FOXRED2Q8IWF2 684 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 MKXQ8IYA7 352 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 TMEM251Q8N6I4 163 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 UBAC2Q8NBM4 344 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 ZNF845Q96IR2 970 aaPredicted RBP12.87□□□□□ -0.35
CHFR-202ENST00000315585 HIST1H2AAQ96QV6 131 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 REPIN1Q9BWE0 567 aaKnown RBP12.87□□□□□ -0.35
CHFR-202ENST00000315585 HES7Q9BYE0 225 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 PRRG4Q9BZD6 226 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 PLK3Q9H4B4 646 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 FAM212BQ9NTI7 297 aaPredicted RBP12.87□□□□□ -0.35
CHFR-202ENST00000315585 CACNA1HO95180 2353 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 IGKV1-12A0A0C4DH73 117 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 H7C1Q1 480 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 DNASE2O00115 360 aaPredicted RBP12.87□□□□□ -0.35
CHFR-202ENST00000315585 ACTL6AO96019 429 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 IGKV1D-12P01611 117 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 OR5AC1P0C628 307 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 MAGEA5P43359 124 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 LHX2P50458 406 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 PLP2Q04941 152 aa12.87□□□□□ -0.35
CHFR-202ENST00000315585 RNPS1Q15287 305 aaKnown RBP12.87□□□□□ -0.35
CHFR-202ENST00000315585 MRPL21Q7Z2W9 205 aaKnown RBP12.87□□□□□ -0.35
CHFR-202ENST00000315585 RIMS4Q9H426 269 aaPredicted RBP12.87□□□□□ -0.35
CHFR-202ENST00000315585 PURGQ9UJV8 347 aaKnown RBP12.87□□□□□ -0.35
CHFR-202ENST00000315585 VPS13AQ96RL7 3174 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 FAM166BA8MTA8 275 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 EDN3P14138 238 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 NOVA1P51513 510 aaKnown RBP12.86□□□□□ -0.35
CHFR-202ENST00000315585 FXYD4P59646 89 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 ARF1P84077 181 aaKnown RBP12.86□□□□□ -0.35
CHFR-202ENST00000315585 SLC10A1Q14973 349 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 MPV17LQ2QL34 196 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 RPL7L1Q6DKI1 246 aaKnown RBP12.86□□□□□ -0.35
CHFR-202ENST00000315585 SLC25A26Q70HW3 274 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 LINC00596Q86U02 117 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 COMMD1Q8N668 190 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 ZFP62Q8NB50 900 aaPredicted RBP12.86□□□□□ -0.35
CHFR-202ENST00000315585 MRPL24Q96A35 216 aaKnown RBP12.86□□□□□ -0.35
CHFR-202ENST00000315585 SPIN2AQ99865 258 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 SPIN2BQ9BPZ2 258 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 LRFN3Q9BTN0 628 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 RSRP1Q9BUV0 290 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 PAPOLGQ9BWT3 736 aaKnown RBP12.86□□□□□ -0.35
CHFR-202ENST00000315585 SPACA1Q9HBV2 294 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 LSM5Q9Y4Y9 91 aaKnown RBP12.86□□□□□ -0.35
CHFR-202ENST00000315585 OTOGLQ3ZCN5 2332 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 KIR2DS1A0A191URI9 304 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 ST8SIA3O43173 380 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 TSPAN9O75954 239 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 TK1P04183 234 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 KIR2DS4P43632 304 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 P2RY1P47900 373 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 RAB5CP51148 216 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 TMEM33P57088 247 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 GNMTQ14749 295 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 KIR2DS1Q14954 304 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 CEACAM21Q3KPI0 293 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 ZNF766Q5HY98 468 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 ATP1A1-AS1Q5TC04 95 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 ATRAIDQ6UW56 229 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 SLC39A7Q92504 469 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 RHOFQ9HBH0 211 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 UQCC1Q9NVA1 299 aa12.86□□□□□ -0.35
CHFR-202ENST00000315585 NCKAP5O14513 1909 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 PQLC2LA1A4F0 135 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 TRIM77I1YAP6 450 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 GPR137BO60478 399 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 MED6O75586 246 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 RFC3P40938 356 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 CLDN18P56856 261 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 FGF12P61328 243 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 VASH2Q86V25 355 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 MCEMP1Q8IX19 187 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 ZDHHC23Q8IYP9 409 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
CHFR-202ENST00000315585 CPEB3Q8NE35 698 aaKnown RBP12.85□□□□□ -0.35
CHFR-202ENST00000315585 FGFBP3Q8TAT2 258 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 APH1AQ96BI3 265 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 C18orf12Q96KH6 178 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 HRH4Q9H3N8 390 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 SLC7A10Q9NS82 523 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 AHCTF1Q8WYP5 2266 aa12.85□□□□□ -0.35
CHFR-202ENST00000315585 CDS2O95674 445 aa12.84□□□□□ -0.35
CHFR-202ENST00000315585 SCGB1D2O95969 90 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms