RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 NRG4Q8WWG1 115 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 TFAP2CQ92754 450 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 ORAI1Q96D31 301 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 SMIM19Q96E16 107 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 MYCBPQ99417 103 aaPredicted RBP11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 SLITRK2Q9H156 845 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 BABAM2Q9NXR7 383 aa11.84□□□□□ -0.51
PPP1CA-201ENST00000312989 A0A0G2JK05 382 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 IGHV1-8P0DP01 117 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 COX7A1P24310 79 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 ERP29P30040 261 aaKnown RBP11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 SOX2P48431 317 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 P2RX3P56373 397 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 EDDM3BP56851 147 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 PROK1P58294 105 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 MEF2CQ06413 473 aaPredicted RBP11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 EDDM3AQ14507 147 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 GRK1Q15835 563 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 ZNF626Q68DY1 528 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 ASCL4Q6XD76 172 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 SETD9Q8NE22 299 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 OR11H6Q8NGC7 330 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 COQ2Q96H96 371 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 TMEM80Q96HE8 168 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 DPAGT1Q9H3H5 408 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 PLCXD1Q9NUJ7 323 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 ZNF581Q9P0T4 197 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 PSORS1C1Q9UIG5 152 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 GSTK1Q9Y2Q3 226 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 EXOSC1Q9Y3B2 195 aaKnown RBP11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 FAM96BQ9Y3D0 163 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 LINC00312Q9Y6C7 94 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 VWFP04275 2813 aa11.83□□□□□ -0.52
PPP1CA-201ENST00000312989 CLPSL1A2RUU4 121 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 MAGEA13PA6NCF6 341 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 SIRPB1O00241 398 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 MGST3O14880 152 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 IGFBP3P17936 291 aaPredicted RBP11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 C21orf33P30042 268 aaPredicted RBP11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 ST3GAL4Q11206 333 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 AANATQ16613 207 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 ELP2Q6IA86 826 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 BAIAP2L2Q6UXY1 529 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 GDPD3Q7L5L3 318 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 LYPD6Q86Y78 171 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 PXT1Q8NFP0 134 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 OR5D14Q8NGL3 314 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 OR4F5Q8NH21 305 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 SGMS2Q8NHU3 365 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 PPP1R35Q8TAP8 253 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 GPR148Q8TDV2 347 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 TSEN15Q8WW01 171 aaKnown RBP11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 CITED1Q99966 193 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 C16orf95Q9H693 158 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 HEXA-AS1Q9H8Q6 139 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 RHOFQ9HBH0 211 aa11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 EXOSC4Q9NPD3 245 aaKnown RBP11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 CNOT2Q9NZN8 540 aaKnown RBP11.82□□□□□ -0.52
PPP1CA-201ENST00000312989 A0A1B0GUS0 222 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 A0A1W2PPH5 198 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 IRGMA1A4Y4 181 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 VGLL3A8MV65 326 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 H3BUX3 64 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 SLC33A1O00400 549 aaPredicted RBP11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 TSPAN9O75954 239 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 CSN2P05814 226 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 HCKP08631 526 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 RPSAP08865 295 aaKnown RBP11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 GABRR1P24046 479 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 GDNFP39905 211 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 UTF1Q5T230 341 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 OLFML2AQ68BL7 652 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 TMPRSS11AQ6ZMR5 421 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 C8orf59Q8N0T1 100 aaPredicted RBP11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 ZFP41Q8N8Y5 198 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 OR51T1Q8NGJ9 327 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 OR5R1Q8NH85 324 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 GHSRQ92847 366 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 TMEM106AQ96A25 262 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 ZNF714Q96N38 554 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 ZNF696Q9H7X3 374 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 ZNF281Q9Y2X9 895 aa11.81□□□□□ -0.52
PPP1CA-201ENST00000312989 TRAV8-7A0A075B6U6 113 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 TRBV5-7A0A0A0MS05 114 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 hADV38S2A0JD32 116 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 CHST1O43916 411 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 GPX5O75715 221 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 CLPXO76031 633 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 CYB5AP00167 134 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 ALDOBP05062 364 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 CGB3P0DN86 165 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 CGB7P0DN87 165 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 RAB3AP20336 220 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 OR3A4PP47883 348 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 GLIPR1P48060 266 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 GDPGP1Q6ZNW5 385 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 SGCDQ92629 289 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 CORO2AQ92828 525 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 SSX3Q99909 188 aa11.8□□□□□ -0.52
PPP1CA-201ENST00000312989 PPA2Q9H2U2 334 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms