RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 MED30Q96HR3 178 aa7.52□□□□□ -1.21
PDE4D-201ENST00000309641 UQCC2Q9BRT2 126 aa7.52□□□□□ -1.21
PDE4D-201ENST00000309641 FUNDC2Q9BWH2 189 aa7.52□□□□□ -1.21
PDE4D-201ENST00000309641 TMPRSS13Q9BYE2 586 aa7.52□□□□□ -1.21
PDE4D-201ENST00000309641 MRPS26Q9BYN8 205 aaKnown RBP7.52□□□□□ -1.21
PDE4D-201ENST00000309641 SLITRK2Q9H156 845 aa7.52□□□□□ -1.21
PDE4D-201ENST00000309641 METTL9Q9H1A3 318 aa7.52□□□□□ -1.21
PDE4D-201ENST00000309641 ST3GAL6Q9Y274 331 aa7.52□□□□□ -1.21
PDE4D-201ENST00000309641 TRAV20A0A0B4J274 112 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 IGHV2-70DA0A0C4DH43 119 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 K7N7A8 449 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 SLC17A2O00624 439 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 TK1P04183 234 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 VSIG8P0DPA2 414 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 SLC2A2P11168 524 aaPredicted RBP7.51□□□□□ -1.21
PDE4D-201ENST00000309641 ZNF44P15621 663 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 HTR2CP28335 458 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 SDC2P34741 201 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 ALDH3B2P48448 385 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 MTNR1BP49286 362 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 CAPZA1P52907 286 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 PRB3Q04118 309 aaPredicted RBP7.51□□□□□ -1.21
PDE4D-201ENST00000309641 UNC119Q13432 240 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 TAF9Q16594 264 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 LRRC10Q5BKY1 277 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 DCAF12L2Q5VW00 463 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 BRICD5Q6PL45 260 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 RTN4RL2Q86UN3 420 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 OSR2Q8N2R0 312 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 ZNF561Q8N587 486 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 OR4S1Q8NGB4 309 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 OR51T1Q8NGJ9 327 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 TBC1D15Q8TC07 691 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 RAB40AQ8WXH6 277 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 PLGRKTQ9HBL7 147 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 C19orf12Q9NSK7 152 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 IL36GQ9NZH8 169 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 OR5V1Q9UGF6 321 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 OPN4Q9UHM6 478 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 RPUSD1Q9UJJ7 312 aaKnown RBP7.51□□□□□ -1.21
PDE4D-201ENST00000309641 KCNS2Q9ULS6 477 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 INSIG2Q9Y5U4 225 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 V9GY05 133 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 KIAA2026Q5HYC2 2103 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 JMJD1CQ15652 2540 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 TRAV24A0A0B4J272 114 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 SLC33A1O00400 549 aaPredicted RBP7.51□□□□□ -1.21
PDE4D-201ENST00000309641 AIREO43918 545 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 CSTBP04080 98 aaKnown RBP7.51□□□□□ -1.21
PDE4D-201ENST00000309641 CHRM2P08172 466 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 MGMTP16455 207 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 RAB3BP20337 219 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 GABRR1P24046 479 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 MYL9P24844 172 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 OR3A1P47881 315 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 NPY4RP50391 375 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 RBM11P57052 281 aaKnown RBP7.51□□□□□ -1.21
PDE4D-201ENST00000309641 ERVFRD-1P60508 538 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 QRFPP83859 136 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 EDDM3AQ14507 147 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 SPIN3Q5JUX0 258 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 SLC16A12Q6ZSM3 486 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 BPIFB2Q8N4F0 458 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 OR51D1Q8NGF3 324 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 FOXRED1Q96CU9 486 aaPredicted RBP7.51□□□□□ -1.21
PDE4D-201ENST00000309641 KCTD7Q96MP8 289 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 S100A13Q99584 98 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 NUDT16L1Q9BRJ7 211 aaKnown RBP7.51□□□□□ -1.21
PDE4D-201ENST00000309641 DCTN5Q9BTE1 182 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 PPA2Q9H2U2 334 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 ING3Q9NXR8 418 aa7.51□□□□□ -1.21
PDE4D-201ENST00000309641 NAV3Q8IVL0 2385 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 A0A0G2JMP0 313 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 A0A0X1KG70 313 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 KIR2DS1A0A191URI9 304 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 IFITM5A6NNB3 132 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 SH2D1BO14796 132 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 DEGS1O15121 323 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 CRTAPO75718 401 aaPredicted RBP7.5□□□□□ -1.21
PDE4D-201ENST00000309641 GTF2F2P13984 249 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 NCS1P62166 190 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 ARF6P62330 175 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 FAM120AOSQ5T036 256 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 SIGIRRQ6IA17 410 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 OR8H2Q8N162 312 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 OR4M2Q8NGB6 313 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 OR6M1Q8NGM8 313 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 SELENOIQ9C0D9 397 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 C7orf69Q9H7B7 122 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 RHOFQ9HBH0 211 aa7.5□□□□□ -1.21
PDE4D-201ENST00000309641 DSCAML1Q8TD84 2053 aa7.49□□□□□ -1.21
PDE4D-201ENST00000309641 A0A0A6YYD4 124 aa7.49□□□□□ -1.21
PDE4D-201ENST00000309641 PPIAL4CA0A0B4J2A2 164 aa7.49□□□□□ -1.21
PDE4D-201ENST00000309641 TMEM14DPA8MWL7 114 aa7.49□□□□□ -1.21
PDE4D-201ENST00000309641 OR7C1O76099 320 aaPredicted RBP7.49□□□□□ -1.21
PDE4D-201ENST00000309641 MPIG6BO95866 241 aa7.49□□□□□ -1.21
PDE4D-201ENST00000309641 PPIAL4GP0DN37 164 aa7.49□□□□□ -1.21
PDE4D-201ENST00000309641 CPT2P23786 658 aa7.49□□□□□ -1.21
PDE4D-201ENST00000309641 LMO1P25800 156 aa7.49□□□□□ -1.21
PDE4D-201ENST00000309641 EDDM3BP56851 147 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms