RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 MMP25Q9NPA2 562 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 PLA2G3Q9NZ20 509 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 GNG13Q9P2W3 67 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 NSG2Q9Y328 171 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 RHBDD3Q9Y3P4 386 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 TMED7-TICAM2A0A0A6YYA0 188 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 ZNF735P0CB33 412 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 HNF1AP20823 631 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 PAX5Q02548 391 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 EGR3Q06889 387 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 SLC17A1Q14916 467 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 DCAF10Q5QP82 559 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 MUCL1Q96DR8 90 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 SLC25A31Q9H0C2 315 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 RCL1Q9Y2P8 373 aaKnown RBP9.57□□□□□ -0.88
LSM3-201ENST00000306024 NBASA2RRP1 2371 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 ARPC3O15145 178 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 CD46P15529 392 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 OR3A1P47881 315 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 NHLH1Q02575 133 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 PPA1Q15181 289 aa9.57□□□□□ -0.88
LSM3-201ENST00000306024 SLC25A43Q8WUT9 341 aaPredicted RBP9.57□□□□□ -0.88
LSM3-201ENST00000306024 ZNF107Q9UII5 783 aaPredicted RBP9.57□□□□□ -0.88
LSM3-201ENST00000306024 BOKQ9UMX3 212 aaPredicted RBP9.57□□□□□ -0.88
LSM3-201ENST00000306024 A6NNC1 897 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 A8MWP6 167 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 PRR32B1ATL7 298 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 DVL1O14640 695 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 SIAH2O43255 324 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 GPR137BO60478 399 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 SLC6A9P48067 706 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 HLA-DRB3P79483 266 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 TLE4Q04727 773 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 ATP1A1-AS1Q5TC04 95 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 MEX3BQ6ZN04 569 aaKnown RBP9.56□□□□□ -0.88
LSM3-201ENST00000306024 ZNF664Q8N3J9 261 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 PRSS35Q8N3Z0 413 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 CYB561D1Q8N8Q1 229 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 OR5R1Q8NH85 324 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 RNF128Q8TEB7 428 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 TRBV5-7A0A0A0MS05 114 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 ZNF850A8MQ14 1090 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 M0QZK8 103 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 NKX2-8O15522 239 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 DLEU1O43261 78 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 GGCTO75223 188 aaKnown RBP9.56□□□□□ -0.88
LSM3-201ENST00000306024 GAPDHP04406 335 aaKnown RBP9.56□□□□□ -0.88
LSM3-201ENST00000306024 SEC11BP0C7V7 166 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 PGA3P0DJD8 388 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 MSX1P28360 303 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 SRSF4Q08170 494 aaKnown RBP9.56□□□□□ -0.88
LSM3-201ENST00000306024 ZNF880Q6PDB4 577 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 GRINAQ7Z429 371 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 NKAIN3Q8N8D7 197 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 OR51T1Q8NGJ9 327 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 NEK7Q8TDX7 302 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 VPS25Q9BRG1 176 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 B9D1Q9UPM9 204 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 RRP8O43159 456 aaKnown RBP9.56□□□□□ -0.88
LSM3-201ENST00000306024 SNU13P55769 128 aaKnown RBP9.56□□□□□ -0.88
LSM3-201ENST00000306024 HGFACQ04756 655 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 HNF4GQ14541 408 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 JOSD1Q15040 202 aaPredicted RBP9.56□□□□□ -0.88
LSM3-201ENST00000306024 ANKRD55Q3KP44 614 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 TMEM176BQ3YBM2 270 aaPredicted RBP9.56□□□□□ -0.88
LSM3-201ENST00000306024 SLC22A24Q8N4F4 322 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 TMEM217Q8N7C4 229 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 NFAM1Q8NET5 270 aaPredicted RBP9.56□□□□□ -0.88
LSM3-201ENST00000306024 OR4D6Q8NGJ1 314 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 OR13D1Q8NGV5 346 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 OR6X1Q8NH79 312 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 DDIT4LQ96D03 193 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 TMEM59Q9BXS4 323 aa9.56□□□□□ -0.88
LSM3-201ENST00000306024 SPTBN4Q9H254 2564 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 TSPAN2O60636 221 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 FPR2P25090 351 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 KIR3DL2P43630 455 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 TAS2R46P59540 309 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 MRPS34P82930 218 aaKnown RBP9.55□□□□□ -0.88
LSM3-201ENST00000306024 ZNF266Q14584 549 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 FAM189A2Q15884 450 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 GNRHR2Q96P88 292 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 STARD10Q9Y365 291 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 DNAJC13O75165 2243 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 A0A1W2PPQ1 181 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 HBE1P02100 147 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 LIFP15018 202 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 ELOBQ15370 118 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 CMTM1Q8IZ96 169 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 EMG1Q92979 244 aaKnown RBP9.55□□□□□ -0.88
LSM3-201ENST00000306024 MOGAT1Q96PD6 335 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 TMEM208Q9BTX3 173 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 NMNAT2Q9BZQ4 307 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 ICAM5Q9UMF0 924 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 IFITM10A6NMD0 228 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 ZNF891A8MT65 544 aaPredicted RBP9.55□□□□□ -0.88
LSM3-201ENST00000306024 SHISA8B8ZZ34 492 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 NPIPA5E9PKD4 350 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 METTL15P1P0C7V9 234 aa9.55□□□□□ -0.88
LSM3-201ENST00000306024 DANCRP0C864 163 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms