RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 EIF5AL1Q6IS14 154 aaKnown RBP11.71□□□□□ -0.53
CTDP1-202ENST00000299543 OPN5Q6U736 354 aa11.71□□□□□ -0.53
CTDP1-202ENST00000299543 FAM71E2Q8N5Q1 922 aa11.71□□□□□ -0.53
CTDP1-202ENST00000299543 SLC30A7Q8NEW0 376 aa11.71□□□□□ -0.53
CTDP1-202ENST00000299543 EMG1Q92979 244 aaKnown RBP11.71□□□□□ -0.53
CTDP1-202ENST00000299543 MRPL24Q96A35 216 aaKnown RBP11.71□□□□□ -0.53
CTDP1-202ENST00000299543 REEP6Q96HR9 211 aa11.71□□□□□ -0.53
CTDP1-202ENST00000299543 MEMO1Q9Y316 297 aa11.71□□□□□ -0.53
CTDP1-202ENST00000299543 CD5P06127 495 aa11.71□□□□□ -0.54
CTDP1-202ENST00000299543 CXCL1P09341 107 aa11.71□□□□□ -0.54
CTDP1-202ENST00000299543 CAMLGP49069 296 aa11.71□□□□□ -0.54
CTDP1-202ENST00000299543 GNG10P50151 68 aa11.71□□□□□ -0.54
CTDP1-202ENST00000299543 RPS18P62269 152 aaKnown RBP11.71□□□□□ -0.54
CTDP1-202ENST00000299543 PLXDC2Q6UX71 529 aa11.71□□□□□ -0.54
CTDP1-202ENST00000299543 RPS19BP1Q86WX3 136 aaKnown RBP11.71□□□□□ -0.54
CTDP1-202ENST00000299543 IFI44Q8TCB0 444 aa11.71□□□□□ -0.54
CTDP1-202ENST00000299543 HS3ST3B1Q9Y662 390 aa11.71□□□□□ -0.54
CTDP1-202ENST00000299543 PATE3B3GLJ2 98 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 ZNF587BE7ETH6 402 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 OTX2P32243 289 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 SSR4P51571 173 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 PKIAP61925 76 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 RSPO1Q2MKA7 263 aaPredicted RBP11.7□□□□□ -0.54
CTDP1-202ENST00000299543 C5orf24Q7Z6I8 188 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 MAML2Q8IZL2 1156 aaPredicted RBP11.7□□□□□ -0.54
CTDP1-202ENST00000299543 PIGCQ92535 297 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 BORCS8Q96FH0 119 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 PARPBPQ9NWS1 579 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 PADI1Q9ULC6 663 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 OSGIN2Q9Y236 505 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 SIT1Q9Y3P8 196 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 ZNF407Q9C0G0 2248 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 C9J4A7 227 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 TRGC2P03986 189 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 PET100P0DJ07 73 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 RPL12P30050 165 aaKnown RBP11.7□□□□□ -0.54
CTDP1-202ENST00000299543 FCGR2CP31995 323 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 THBS4P35443 961 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 ASCL1P50553 236 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 PIGPP57054 158 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 TNFRSF9Q07011 255 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 PCOLCEQ15113 449 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 CLEC12BQ2HXU8 276 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 P4HA3Q7Z4N8 544 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 OR5L1Q8NGL2 311 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 HAS2Q92819 552 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 C2orf88Q9BSF0 95 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 BCO1Q9HAY6 547 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.7□□□□□ -0.54
CTDP1-202ENST00000299543 C1orf123Q9NWV4 160 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 RCL1Q9Y2P8 373 aaKnown RBP11.7□□□□□ -0.54
CTDP1-202ENST00000299543 NSG1A0A0A6YYJ2 146 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 TAGLN2P37802 199 aaKnown RBP11.7□□□□□ -0.54
CTDP1-202ENST00000299543 RPS23P62266 143 aaKnown RBP11.7□□□□□ -0.54
CTDP1-202ENST00000299543 LPAL2Q16609 132 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 PIGYQ3MUY2 71 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 NTNG2Q96CW9 530 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 SRXN1Q9BYN0 137 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 METTL9Q9H1A3 318 aa11.7□□□□□ -0.54
CTDP1-202ENST00000299543 TOX3O15405 576 aaPredicted RBP11.69□□□□□ -0.54
CTDP1-202ENST00000299543 TNFSF12O43508 249 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 TUBG1P23258 451 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 DVL1P1P54792 670 aaPredicted RBP11.69□□□□□ -0.54
CTDP1-202ENST00000299543 SOHLH1Q5JUK2 328 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 MEX3BQ6ZN04 569 aaKnown RBP11.69□□□□□ -0.54
CTDP1-202ENST00000299543 OR10AD1Q8NGE0 317 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 SNX22Q96L94 193 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 ZNF700Q9H0M5 742 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 CCDC187A0A096LP49 1063 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 SERPINE3A8MV23 424 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 F8VVB4 439 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 F8VWA3 439 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 GEMIN2O14893 280 aaKnown RBP11.69□□□□□ -0.54
CTDP1-202ENST00000299543 CXCL13O43927 109 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 ZIC3O60481 467 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 RHEBQ15382 184 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 HIST3H3Q16695 136 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 GUK1Q16774 197 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 GGNBP1Q5YKI7 109 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 HSD17B11Q8NBQ5 300 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 PP6455Q8WZ26 134 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 AK3Q9UIJ7 227 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 ADAMTS9Q9P2N4 1935 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 FREM1Q5H8C1 2179 aa11.69□□□□□ -0.54
CTDP1-202ENST00000299543 TGIF2-C20orf24A0A0A6YYL0 155 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 CCDC163A0A0D9SF12 145 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST1H2BKO60814 126 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST1H2BJP06899 126 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST1H2BOP23527 126 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 PAX6P26367 422 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST1H2BBP33778 126 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST1H2BDP58876 126 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST1H2BCP62807 126 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 SRYQ05066 204 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST2H2BEQ16778 126 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.68□□□□□ -0.54
CTDP1-202ENST00000299543 LHFPL1Q86WI0 220 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 FBXL14Q8N1E6 418 aa11.68□□□□□ -0.54
CTDP1-202ENST00000299543 FADS6Q8N9I5 356 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms