RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 SIRPB1O00241 398 aa16.37■□□□□ 0.21
TIMP4-201ENST00000287814 CCRL2O00421 344 aa16.37■□□□□ 0.21
TIMP4-201ENST00000287814 SH2D1BO14796 132 aa16.37■□□□□ 0.21
TIMP4-201ENST00000287814 PIGYQ3MUY2 71 aa16.37■□□□□ 0.21
TIMP4-201ENST00000287814 NKAIN3Q8N8D7 197 aa16.37■□□□□ 0.21
TIMP4-201ENST00000287814 OR4S1Q8NGB4 309 aa16.37■□□□□ 0.21
TIMP4-201ENST00000287814 OR51T1Q8NGJ9 327 aa16.37■□□□□ 0.21
TIMP4-201ENST00000287814 WDFY2Q96P53 400 aa16.37■□□□□ 0.21
TIMP4-201ENST00000287814 TBX15Q96SF7 602 aa16.37■□□□□ 0.21
TIMP4-201ENST00000287814 EXOSC4Q9NPD3 245 aaKnown RBP16.37■□□□□ 0.21
TIMP4-201ENST00000287814 IGHV3OR16-10A0A075B7F0 116 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 MEGF11A6BM72 1044 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 TNFAIP8O95379 198 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 IGHV4-38-2P0DP08 117 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 CD37P11049 281 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 LMO1P25800 156 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 SCN1BQ07699 218 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 NEDD8Q15843 81 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 SYT6Q5T7P8 510 aaPredicted RBP16.36■□□□□ 0.21
TIMP4-201ENST00000287814 GLIPR1L1Q6UWM5 242 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 OR8H2Q8N162 312 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 Q8N7P7 452 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 PCGF1Q9BSM1 259 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 ONECUT1Q9UBC0 465 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 GLS2Q9UI32 602 aa16.36■□□□□ 0.21
TIMP4-201ENST00000287814 A0A0G2JK05 382 aa16.35■□□□□ 0.21
TIMP4-201ENST00000287814 TOX4O94842 621 aa16.35■□□□□ 0.21
TIMP4-201ENST00000287814 SERPINA2P20848 420 aa16.35■□□□□ 0.21
TIMP4-201ENST00000287814 GABRR1P24046 479 aa16.35■□□□□ 0.21
TIMP4-201ENST00000287814 CALRP27797 417 aaKnown RBP16.35■□□□□ 0.21
TIMP4-201ENST00000287814 OR3A1P47881 315 aa16.35■□□□□ 0.21
TIMP4-201ENST00000287814 DLX1P56177 255 aa16.35■□□□□ 0.21
TIMP4-201ENST00000287814 SLC22A6Q4U2R8 563 aa16.35■□□□□ 0.21
TIMP4-201ENST00000287814 TMEM200BQ69YZ2 307 aa16.35■□□□□ 0.21
TIMP4-201ENST00000287814 METAP1DQ6UB28 335 aaPredicted RBP16.35■□□□□ 0.21
TIMP4-201ENST00000287814 TSPAN14Q8NG11 270 aa16.35■□□□□ 0.21
TIMP4-201ENST00000287814 UQCC2Q9BRT2 126 aa16.35■□□□□ 0.21
TIMP4-201ENST00000287814 TRBV23-1A0A0A0MS06 115 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 SHISA3A0PJX4 238 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 MEX3AA1L020 520 aaKnown RBP16.34■□□□□ 0.21
TIMP4-201ENST00000287814 ARL6IP5O75915 188 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 ZNF44P15621 663 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 BMXP51813 675 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 RPL31P62899 125 aaKnown RBP16.34■□□□□ 0.21
TIMP4-201ENST00000287814 PRB3Q04118 309 aaPredicted RBP16.34■□□□□ 0.21
TIMP4-201ENST00000287814 METTL11BQ5VVY1 283 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 AWAT2Q6E213 333 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 FAM185AQ8N0U4 392 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 OSR2Q8N2R0 312 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 TPRX1Q8N7U7 411 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 DMRTB1Q96MA1 342 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 S100A13Q99584 98 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 ZNF696Q9H7X3 374 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 AK6Q9Y3D8 172 aaKnown RBP16.34■□□□□ 0.21
TIMP4-201ENST00000287814 TRDV1A0A1B0GX56 115 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 A0A1W2PQ09 198 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 SLC33A1O00400 549 aaPredicted RBP16.34■□□□□ 0.21
TIMP4-201ENST00000287814 DEGS1O15121 323 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 CSTBP04080 98 aaKnown RBP16.34■□□□□ 0.21
TIMP4-201ENST00000287814 GRK1Q15835 563 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 C1orf100Q5SVJ3 147 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 TBC1D15Q8TC07 691 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 C22orf15Q8WYQ4 148 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 ST3GAL6Q9Y274 331 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 SOX21Q9Y651 276 aaPredicted RBP16.34■□□□□ 0.21
TIMP4-201ENST00000287814 KPTNQ9Y664 436 aa16.34■□□□□ 0.21
TIMP4-201ENST00000287814 TRAV24A0A0B4J272 114 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 EPHA1P21709 976 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 EDDM3BP56851 147 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 RBM11P57052 281 aaKnown RBP16.33■□□□□ 0.2
TIMP4-201ENST00000287814 ERVFRD-1P60508 538 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 EDDM3AQ14507 147 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 ZNF273Q14593 569 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 IL13RA2Q14627 380 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 GLT8D1Q68CQ7 371 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 GDPD3Q7L5L3 318 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 TEX29Q8N6K0 151 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 TMEM104Q8NE00 496 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 OR5D13Q8NGL4 314 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 SLITRK2Q9H156 845 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 PPA2Q9H2U2 334 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 ZNF69Q9UC07 566 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 NUP50Q9UKX7 468 aa16.33■□□□□ 0.2
TIMP4-201ENST00000287814 A0A087WXM4 84 aa16.32■□□□□ 0.2
TIMP4-201ENST00000287814 TRAV40A0A0B4J280 105 aa16.32■□□□□ 0.2
TIMP4-201ENST00000287814 GEMIN2O14893 280 aaKnown RBP16.32■□□□□ 0.2
TIMP4-201ENST00000287814 ZNF780AO75290 641 aaPredicted RBP16.32■□□□□ 0.2
TIMP4-201ENST00000287814 NHLRC3Q5JS37 347 aa16.32■□□□□ 0.2
TIMP4-201ENST00000287814 C22orf42Q6IC83 251 aa16.32■□□□□ 0.2
TIMP4-201ENST00000287814 TCF23Q7RTU1 214 aa16.32■□□□□ 0.2
TIMP4-201ENST00000287814 VMO1Q7Z5L0 202 aa16.32■□□□□ 0.2
TIMP4-201ENST00000287814 BCL6BQ8N143 479 aaPredicted RBP16.32■□□□□ 0.2
TIMP4-201ENST00000287814 C11orf42Q8N5U0 333 aa16.32■□□□□ 0.2
TIMP4-201ENST00000287814 KIR3DL3Q8N743 410 aa16.32■□□□□ 0.2
TIMP4-201ENST00000287814 FOXRED1Q96CU9 486 aaPredicted RBP16.32■□□□□ 0.2
TIMP4-201ENST00000287814 BANF2Q9H503 90 aa16.32■□□□□ 0.2
TIMP4-201ENST00000287814 CENPVL3A0A0U1RRI6 287 aa16.31■□□□□ 0.2
TIMP4-201ENST00000287814 MGST3O14880 152 aa16.31■□□□□ 0.2
TIMP4-201ENST00000287814 GTF2F2P13984 249 aa16.31■□□□□ 0.2
TIMP4-201ENST00000287814 CCL3L1P16619 93 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms