RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SPACA9Q96E40 222 aaPredicted RBP11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 LHX6Q9UPM6 363 aa11.1□□□□□ -0.63
SLC6A1-201ENST00000287766 A0A1W2PP11 408 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 CHEK1O14757 476 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 OR8U8P0C7N1 319 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF17P17021 662 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 NSUN5P2Q63ZY6 315 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 C6orf201Q7Z4U5 140 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 IER2Q9BTL4 223 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 NOSIPQ9Y314 301 aaKnown RBP11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 CLEC18AA5D8T8 446 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 EIF1BO60739 113 aaKnown RBP11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 HOXD4P09016 255 aaPredicted RBP11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 POU2F2P09086 479 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 DLK1P80370 383 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 CLEC18CQ8NCF0 446 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 MCHR2Q969V1 340 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 VOPP1Q96AW1 172 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 ADAT3Q96EY9 351 aaPredicted RBP11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 SHARPINQ9H0F6 387 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 FNDC1Q4ZHG4 1894 aaPredicted RBP11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 LINC00587B1AMM8 73 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 FCN1O00602 326 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNHIT1O43257 154 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 UBE2G1P62253 170 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 FAM78BQ5VT40 261 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 RABEPKQ7Z6M1 372 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 ANKRD37Q7Z713 158 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 LDLRAD3Q86YD5 345 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 NOXO1Q8NFA2 376 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 IFI44Q8TCB0 444 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 ZNF721Q8TF20 911 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 C12orf49Q9H741 205 aa11.09□□□□□ -0.63
SLC6A1-201ENST00000287766 ELOA3CA0A087WX78 387 aaPredicted RBP11.08□□□□□ -0.63
SLC6A1-201ENST00000287766 DHHO43323 396 aa11.08□□□□□ -0.63
SLC6A1-201ENST00000287766 RPS4XP62701 263 aaKnown RBP11.08□□□□□ -0.63
SLC6A1-201ENST00000287766 EGR4Q05215 589 aa11.08□□□□□ -0.63
SLC6A1-201ENST00000287766 EDDM3AQ14507 147 aa11.08□□□□□ -0.63
SLC6A1-201ENST00000287766 KISS1Q15726 138 aa11.08□□□□□ -0.63
SLC6A1-201ENST00000287766 PRAMEF5Q5TYX0 476 aa11.08□□□□□ -0.63
SLC6A1-201ENST00000287766 PRAMEF6Q5VXH4 476 aa11.08□□□□□ -0.63
SLC6A1-201ENST00000287766 GPR61Q9BZJ8 451 aa11.08□□□□□ -0.63
SLC6A1-201ENST00000287766 UBE2L5PA0A1B0GUS4 154 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 HSPB2A8KAH6 182 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 SFT2D2O95562 160 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 RPLP1P05386 114 aaKnown RBP11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 SLC25A6P12236 298 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 GCH1P30793 250 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 NXPH1P58417 271 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 HSPB2Q16082 182 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 CMTM2Q8TAZ6 248 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 UBALD1Q8TB05 177 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 A6NCN8 305 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 MUC1P15941 1255 aaPredicted RBP11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 DDTP30046 118 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 GGTLC2Q14390 218 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 FUT9Q9Y231 359 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 PLXND1Q9Y4D7 1925 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 RNF224P0DH78 156 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 PNLIPP16233 465 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 EFNB1P98172 346 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 MOB1BQ7L9L4 216 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 OR2C3Q8N628 320 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 ADAD2Q8NCV1 583 aaKnown RBP11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 OR2T10Q8NGZ9 312 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 SOX7Q9BT81 388 aa11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 ZNF552Q9H707 407 aaPredicted RBP11.08□□□□□ -0.64
SLC6A1-201ENST00000287766 PRR32B1ATL7 298 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 H3BQ15 152 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 POLR2GP62487 172 aaKnown RBP eCLIP11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 RGS7BPQ6MZT1 257 aaPredicted RBP11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 CATSPERDQ86XM0 798 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 OR10A7Q8NGE5 316 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 OR8B12Q8NGG6 310 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 TMEM9BQ9NQ34 198 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 MCTS1Q9ULC4 181 aaKnown RBP11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 ST3GAL6Q9Y274 331 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 MAP1LC3B2A6NCE7 125 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 OPN1MWP04001 364 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 OPN1MW2P0DN77 364 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 OPN1MW3P0DN78 364 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 H2BFSP57053 126 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 FZD5Q13467 585 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 BSXQ3C1V8 233 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 MAP1LC3BQ9GZQ8 125 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 RIF1Q5UIP0 2472 aaKnown RBP11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 CXorf65A6NEN9 183 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 MFSD2BA6NFX1 497 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 RAB29O14966 203 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 RPS11P62280 158 aaKnown RBP eCLIP11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 MPV17LQ2QL34 196 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 SLC25A26Q70HW3 274 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 FAAP24Q9BTP7 215 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 MFNGO00587 321 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 HIST1H1DP16402 221 aaKnown RBP11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 FPR2P25090 351 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 EDDM3BP56851 147 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 SHBQ15464 509 aa11.07□□□□□ -0.64
SLC6A1-201ENST00000287766 RSPO4Q2I0M5 234 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms