RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 MEF2DQ14814 521 aa19.32■□□□□ 0.68
SMARCB1-201ENST00000263121 ZNF782Q6ZMW2 699 aaPredicted RBP19.32■□□□□ 0.68
SMARCB1-201ENST00000263121 LILRB1Q8NHL6 650 aaPredicted RBP19.32■□□□□ 0.68
SMARCB1-201ENST00000263121 FN3KRPQ9HA64 309 aa19.32■□□□□ 0.68
SMARCB1-201ENST00000263121 ZNF230Q9UIE0 474 aaPredicted RBP19.32■□□□□ 0.68
SMARCB1-201ENST00000263121 TRAV24A0A0B4J272 114 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 A0A0B4J293 547 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 hCG_1807616A0A1W2PRN6 198 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 WNT9BO14905 357 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 C1QL1O75973 258 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 GLAP06280 429 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 CD55P08174 381 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 TNFSF4P23510 183 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 GMFBP60983 142 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 EFNB3Q15768 340 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 RNASE10Q5GAN6 216 aaKnown RBP19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 ACP7Q6ZNF0 438 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 SUMF2Q8NBJ7 301 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 BEST4Q8NFU0 473 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 OR51S1Q8NGJ8 323 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 OR4K15Q8NH41 348 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 LRRC29Q8WV35 223 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 ST6GALNAC5Q9BVH7 336 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 CHST6Q9GZX3 395 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 WDR13Q9H1Z4 485 aa19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 CHD3Q12873 2000 aaKnown RBP19.31■□□□□ 0.68
SMARCB1-201ENST00000263121 C17orf100A8MU93 164 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 INMT-MINDY4F8WBC2 141 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 M0R233 179 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 FCGR3AP08637 254 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 GLRA1P23415 457 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 HRH1P35367 487 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 BTG1P62324 171 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 MRPS15P82914 257 aaKnown RBP19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 MICBQ29980 383 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 ACTBL2Q562R1 376 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 FIP1L1Q6UN15 594 aaKnown RBP19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 MOGAT3Q86VF5 341 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 PIK3IP1Q96FE7 263 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 C12orf4Q9NQ89 552 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 ZNF701Q9NV72 531 aaPredicted RBP19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 TRAV6A0A075B6T7 132 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 SRRM5B3KS81 715 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 MCRIP1C9JLW8 97 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 DEGS1O15121 323 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 NDUFB6O95139 128 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 AMY2AP04746 511 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 AMY2BP19961 511 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 HOXA4Q00056 320 aaPredicted RBP19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 BPIFB2Q8N4F0 458 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 MAFIPQ8WZ33 124 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 SLC6A7Q99884 636 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 C20orf85Q9H1P6 137 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 CISD1Q9NZ45 108 aaKnown RBP19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 EDARQ9UNE0 448 aa19.3■□□□□ 0.68
SMARCB1-201ENST00000263121 OR2H2O95918 312 aa19.29■□□□□ 0.68
SMARCB1-201ENST00000263121 RAG2P55895 527 aa19.29■□□□□ 0.68
SMARCB1-201ENST00000263121 MST1LQ2TV78 715 aa19.29■□□□□ 0.68
SMARCB1-201ENST00000263121 ZNF672Q499Z4 452 aaPredicted RBP19.29■□□□□ 0.68
SMARCB1-201ENST00000263121 VAX1Q5SQQ9 334 aa19.29■□□□□ 0.68
SMARCB1-201ENST00000263121 DHRS9Q9BPW9 319 aa19.29■□□□□ 0.68
SMARCB1-201ENST00000263121 DPCDQ9BVM2 203 aaPredicted RBP19.29■□□□□ 0.68
SMARCB1-201ENST00000263121 SLC2A8Q9NY64 477 aa19.29■□□□□ 0.68
SMARCB1-201ENST00000263121 RASL12Q9NYN1 266 aa19.29■□□□□ 0.68
SMARCB1-201ENST00000263121 IGKV1D-8A0A087WSZ0 117 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 DISC1C4P0D8 188 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 SH2D1BO14796 132 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 KNG1P01042 644 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 H2AFB2P0C5Z0 115 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 ZNF44P15621 663 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 EGR1P18146 543 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 RBMS2Q15434 407 aaKnown RBP19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 TATDN3Q17R31 274 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 SMIM21Q3B7S5 101 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 Q6ZPA2 131 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 ERGIC1Q969X5 290 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 GCM1Q9NP62 436 aa19.28■□□□□ 0.68
SMARCB1-201ENST00000263121 FAM221AA4D161 298 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 B9A039 149 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 SLC33A1O00400 549 aaPredicted RBP19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 HS3ST1O14792 307 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 HAND1O96004 215 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 NAPSAO96009 420 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 LHBP01229 141 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 PMP2P02689 132 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 TAS2R46P59540 309 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 GCSAMQ8N6F7 178 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 Q8TCH9 128 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 RDH5Q92781 318 aa19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 ANKHD1Q8IWZ3 2542 aaKnown RBP19.27■□□□□ 0.68
SMARCB1-201ENST00000263121 HSPB6O14558 160 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 RBMXP38159 391 aaKnown RBP19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 RAB25P57735 213 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 RBM39Q14498 530 aaKnown RBP19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 ZMYND11Q15326 602 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 TESK1Q15569 626 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 FAM209AQ5JX71 171 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 FAM90A1Q86YD7 464 aa19.27■□□□□ 0.67
SMARCB1-201ENST00000263121 OR5AP2Q8NGF4 316 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms