RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 PGAM5Q96HS1 289 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 RPP25Q9BUL9 199 aaKnown RBP13.05□□□□□ -0.32
XRCC1-201ENST00000262887 GPR87Q9BY21 358 aa13.05□□□□□ -0.32
XRCC1-201ENST00000262887 E9PLN8 166 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 OMGP23515 440 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 CAPZBP47756 277 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 RND2P52198 227 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 EFNA3P52797 238 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 SLC10A1Q14973 349 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 NOXO1Q8NFA2 376 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 HAS2Q92819 552 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 FGF14Q92915 247 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 PIGTQ969N2 578 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 TMEM208Q9BTX3 173 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 PNRC2Q9NPJ4 139 aaKnown RBP13.04□□□□□ -0.32
XRCC1-201ENST00000262887 ALKBH4Q9NXW9 302 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 B3GAT1Q9P2W7 334 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 OR14J1Q9UGF5 321 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 DKKL1Q9UK85 242 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 SLC7A11Q9UPY5 501 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 IGSF23A1L1A6 192 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 C5orf63A6NC05 138 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 LIPT2A6NK58 231 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 SHISA8B8ZZ34 492 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 MSTNO14793 375 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 GEMIN2O14893 280 aaKnown RBP13.04□□□□□ -0.32
XRCC1-201ENST00000262887 IGHG1P01857 330 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 FAHP16930 419 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 H3F3AP84243 136 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 TAF9Q16594 264 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 P4HA3Q7Z4N8 544 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 FAAP24Q9BTP7 215 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 ACTR3CQ9C0K3 210 aaPredicted RBP13.04□□□□□ -0.32
XRCC1-201ENST00000262887 TMEM242Q9NWH2 141 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 ADAMTS9Q9P2N4 1935 aa13.04□□□□□ -0.32
XRCC1-201ENST00000262887 IGHV5-51A0A0C4DH38 117 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 ANKUB1A6NFN9 424 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 VSTM2BA6NLU5 285 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 PHF1O43189 567 aaPredicted RBP13.03□□□□□ -0.32
XRCC1-201ENST00000262887 SEMA4FO95754 770 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 LINC00614P0C842 121 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 MSX1P28360 303 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 FOXF1Q12946 379 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 GAGE1Q13065 139 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 PARM1Q6UWI2 310 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 UEVLDQ8IX04 471 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 OR1N1Q8NGS0 311 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 NPSP0C0P6 89 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 PGA3P0DJD8 388 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 FOLR1P15328 257 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 NOVA1P51513 510 aaKnown RBP13.03□□□□□ -0.32
XRCC1-201ENST00000262887 GFERP55789 205 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 EIF3IQ13347 325 aaKnown RBP13.03□□□□□ -0.32
XRCC1-201ENST00000262887 CDCP2Q5VXM1 449 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 MEX3BQ6ZN04 569 aaKnown RBP13.03□□□□□ -0.32
XRCC1-201ENST00000262887 SLC35G3Q8N808 338 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 TMEM171Q8WVE6 324 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 LYZL4Q96KX0 146 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 SYT3Q9BQG1 590 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 HS3ST3A1Q9Y663 406 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 A0A1W2PNV4 684 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 CYB5R3P00387 301 aaPredicted RBP13.03□□□□□ -0.32
XRCC1-201ENST00000262887 HBE1P02100 147 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 AMBPP02760 352 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 GRB2P62993 217 aaKnown RBP13.03□□□□□ -0.32
XRCC1-201ENST00000262887 TLE4Q04727 773 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 CPEB2Q7Z5Q1 589 aaKnown RBP13.03□□□□□ -0.32
XRCC1-201ENST00000262887 OR10G4Q8NGN3 311 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 OR11L1Q8NGX0 322 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 GNPNAT1Q96EK6 184 aaPredicted RBP13.03□□□□□ -0.32
XRCC1-201ENST00000262887 C11orf1Q9H5F2 150 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 PLEKHF2Q9H8W4 249 aa13.03□□□□□ -0.32
XRCC1-201ENST00000262887 TRBV24-1A0A075B6N3 115 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF732B4DXR9 585 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 PNRC1Q12796 327 aaPredicted RBP13.02□□□□□ -0.33
XRCC1-201ENST00000262887 CLN3Q13286 438 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 C16orf47Q6ZP98 133 aaPredicted RBP13.02□□□□□ -0.33
XRCC1-201ENST00000262887 SUMF1Q8NBK3 374 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 NAXEQ8NCW5 288 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 Q96M66 194 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 A0A1B0GU03 582 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF705GA8MUZ8 300 aaPredicted RBP13.02□□□□□ -0.33
XRCC1-201ENST00000262887 ONECUT2O95948 504 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 RAB11AP62491 216 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 AARDQ4LEZ3 155 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 SAPCD1Q5SSQ6 148 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 CMTM1Q8IZ96 169 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 OR5C1Q8NGR4 320 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 POC1BQ8TC44 478 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 CDH20Q9HBT6 801 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 KNL1Q8NG31 2342 aa13.02□□□□□ -0.33
XRCC1-201ENST00000262887 SPTY2D1-AS1A0A0U1RR47 76 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 LOC102723971A0A1B0GUV8 181 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 DHRS3O75911 302 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 APLNRP35414 380 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 SMAD4Q13485 552 aaKnown RBP13.01□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF441Q8N8Z8 693 aa13.01□□□□□ -0.33
XRCC1-201ENST00000262887 PP6455Q8WZ26 134 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms