RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 IKZF1Q13422 519 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 PDCD1Q15116 288 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 USP43Q70EL4 1123 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 OR2W3Q7Z3T1 314 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 LINC00596Q86U02 117 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 CROCCP3Q8IVE0 287 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 SLC25A46Q96AG3 418 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 ISOC1Q96CN7 298 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 Q96M66 194 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 SELENOIQ9C0D9 397 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 CSPG4Q6UVK1 2322 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 A0A0B4J203 849 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 KIAA1324LA8MWY0 1029 aaPredicted RBP13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 B4DSR2 109 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 K7N7A8 449 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 PHF1O43189 567 aaPredicted RBP13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 NDUFB3O43676 98 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 TMEM127O75204 238 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 MPIG6BO95866 241 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 INHBBP09529 407 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 FOSL1P15407 271 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 ZFP36P26651 326 aaKnown RBP13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 GZMKP49863 264 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 TAF9Q16594 264 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 LRRC10Q5BKY1 277 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 C17orf107Q6ZR85 190 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 CHST4Q8NCG5 386 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 NDNFQ8TB73 568 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 MSI2Q96DH6 328 aaKnown RBP13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 POM121Q96HA1 1249 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 TMEM59Q9BXS4 323 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 SHARPINQ9H0F6 387 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM234AQ9H0X4 552 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 RBM38Q9H0Z9 239 aaKnown RBP13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 DCSTAMPQ9H295 470 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 IFT22Q9H7X7 185 aa13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 SLC25A10Q9UBX3 287 aaPredicted RBP13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 YLPM1P49750 1951 aaKnown RBP13.8□□□□□ -0.2
CHCHD3-201ENST00000262570 ABCA2Q9BZC7 2435 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 TMEM272A0A1B0GTI8 110 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 TMEM82A0PJX8 343 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 SIRPB1O00241 398 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 DEGS1O15121 323 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 PSPNO60542 156 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FOXH1O75593 365 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 TK1P04183 234 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 ZNF44P15621 663 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 RPS27AP62979 156 aaKnown RBP13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 SCN1BQ07699 218 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 MPV17LQ2QL34 196 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 IDNKQ5T6J7 187 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FGFRL1Q8N441 504 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 ASCC1Q8N9N2 400 aaKnown RBP13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 LINC01356Q8N9X3 169 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 TMEM185AQ8NFB2 350 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 SNX22Q96L94 193 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 ZNF581Q9P0T4 197 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 OR5V1Q9UGF6 321 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 POLR3KQ9Y2Y1 108 aaPredicted RBP13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 ABCA1O95477 2261 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 TRAV24A0A0B4J272 114 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A10PA6NDY2 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A18PA6NE21 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A16PA6NEW6 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A20PA6NIJ5 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A8PA6NJQ4 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A7PA6NKC0 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A22PA8MWA6 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A12PA8MX19 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A5PA8MXJ8 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A23PA8MXZ1 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 H3BMQ9 156 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 SLC33A1O00400 549 aaPredicted RBP13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 GPR37O15354 613 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 OR7C1O76099 320 aaPredicted RBP13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 MSMBP08118 114 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A15PP0C7V4 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A13PP0C7W8 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A14PP0C7W9 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM90A24PP0C7X0 464 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 LCN2P80188 198 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 SPCS2Q15005 226 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 C11orf91Q3C1V1 193 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 ST8SIA4Q92187 359 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 TM2D1Q9BX74 207 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 BARHL1Q9BZE3 327 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 LPAR5Q9H1C0 372 aa13.79□□□□□ -0.2
CHCHD3-201ENST00000262570 NOL3O60936 208 aaKnown RBP13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 PAHP00439 452 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 SNRPBP14678 240 aaKnown RBP13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 GABRR1P24046 479 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 SCAND1P57086 179 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 KRTAP1-1Q07627 177 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 PLA2G7Q13093 441 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 CYB5R2Q6BCY4 276 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 METAP1DQ6UB28 335 aaPredicted RBP13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 OR8H2Q8N162 312 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 OR5D13Q8NGL4 314 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 PTX4Q96A99 478 aa13.78□□□□□ -0.2
CHCHD3-201ENST00000262570 MRI1Q9BV20 369 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms