RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 OR51M1Q9H341 326 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 DUX4Q9UBX2 424 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 NOP16Q9Y3C1 178 aaKnown RBP11.69□□□□□ -0.54
VMP1-201ENST00000262291 ACACAQ13085 2346 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 FOXI3A8MTJ6 420 aaPredicted RBP11.69□□□□□ -0.54
VMP1-201ENST00000262291 F8VVB4 439 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 F8VWA3 439 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 KCNAB3O43448 404 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 SCGNO76038 276 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 PPT1P50897 306 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 NUBP1P53384 320 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 GMFBP60983 142 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 FOXF2Q12947 444 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 SMCO1Q147U7 214 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 TMEM42Q69YG0 159 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 ZNF585AQ6P3V2 769 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 COLCA1Q6ZS62 124 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 ZNF546Q86UE3 836 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 C9orf106Q8NAJ2 232 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 STEAP2Q8NFT2 490 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 BCL2L2Q92843 193 aaPredicted RBP11.69□□□□□ -0.54
VMP1-201ENST00000262291 SLAMF9Q96A28 289 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 C10orf35Q96D05 121 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 SEC22AQ96IW7 307 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 PRRT1Q99946 306 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 SLC25A21Q9BQT8 299 aaPredicted RBP11.69□□□□□ -0.54
VMP1-201ENST00000262291 IL36RNQ9UBH0 155 aa11.69□□□□□ -0.54
VMP1-201ENST00000262291 A0A1W2PPE3 182 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 ZNF891A8MT65 544 aaPredicted RBP11.68□□□□□ -0.54
VMP1-201ENST00000262291 DUSP1P28562 367 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 AKR1C3P42330 323 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 ALDH3B1P43353 468 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 IDH3GP51553 393 aaPredicted RBP11.68□□□□□ -0.54
VMP1-201ENST00000262291 ERVS71-1P61550 626 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 KCTD9Q7L273 389 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 FAM219AQ8IW50 185 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 ZNF611Q8N823 705 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 OR5H2Q8NGV7 314 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 SULT4A1Q9BR01 284 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 ZFP57Q9NU63 452 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 EHFQ9NZC4 300 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 HSPB6O14558 160 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 GATCO43716 136 aaKnown RBP11.68□□□□□ -0.54
VMP1-201ENST00000262291 AGFG2O95081 481 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 IGHV1-2P23083 117 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 APLNRP35414 380 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 RBMXP38159 391 aaKnown RBP11.68□□□□□ -0.54
VMP1-201ENST00000262291 OR3A2P47893 321 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 ATP1B3P54709 279 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 Q3ZCU0 254 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 DHRS7BQ6IAN0 325 aaPredicted RBP11.68□□□□□ -0.54
VMP1-201ENST00000262291 OR2T2Q6IF00 324 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 LHFPL2Q6ZUX7 228 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 ZNF488Q96MN9 340 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 REPIN1Q9BWE0 567 aaKnown RBP11.68□□□□□ -0.54
VMP1-201ENST00000262291 COL25A1Q9BXS0 654 aaPredicted RBP11.68□□□□□ -0.54
VMP1-201ENST00000262291 RGCCQ9H4X1 137 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 AK3Q9UIJ7 227 aa11.68□□□□□ -0.54
VMP1-201ENST00000262291 INTS1Q8N201 2190 aaKnown RBP11.68□□□□□ -0.54
VMP1-201ENST00000262291 DHRS7CA6NNS2 312 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 ST8SIA5O15466 376 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 S100PP25815 95 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 ARR3P36575 388 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 NRN1LQ496H8 165 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 ETV3LQ6ZN32 361 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 OR13G1Q8NGZ3 307 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 HPSE2Q8WWQ2 592 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 SPSB4Q96A44 273 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 TM2D1Q9BX74 207 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 CLCF1Q9UBD9 225 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 ST3GAL6Q9Y274 331 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 ESPL1Q14674 2120 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 FIGNL2A6NMB9 653 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 ZNF705EA8MWA4 302 aaPredicted RBP11.67□□□□□ -0.54
VMP1-201ENST00000262291 CD34P28906 385 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 FUT6P51993 359 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 FABP9Q0Z7S8 132 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 MALLQ13021 153 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 IGFL2Q6UWQ7 119 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 SLC30A7Q8NEW0 376 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 CCDC107Q8WV48 283 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 APOBEC3DQ96AK3 386 aaPredicted RBP11.67□□□□□ -0.54
VMP1-201ENST00000262291 TREM1Q9NP99 234 aa11.67□□□□□ -0.54
VMP1-201ENST00000262291 ZNF732B4DXR9 585 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 BCL3P20749 454 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 SLC9A3R2Q15599 337 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 EIF2S3LQ2VIR3 472 aaKnown RBP11.66□□□□□ -0.54
VMP1-201ENST00000262291 PLEKHN1Q494U1 663 aaPredicted RBP11.66□□□□□ -0.54
VMP1-201ENST00000262291 UNQ6126/PRO20091Q6UXV3 157 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 DMBX1Q8NFW5 382 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 OR10AD1Q8NGE0 317 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 EMG1Q92979 244 aaKnown RBP11.66□□□□□ -0.54
VMP1-201ENST00000262291 GMPPAQ96IJ6 420 aaPredicted RBP11.66□□□□□ -0.54
VMP1-201ENST00000262291 PFDN5Q99471 154 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 OCSTAMPQ9BR26 566 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 NUDT16L1Q9BRJ7 211 aaKnown RBP11.66□□□□□ -0.54
VMP1-201ENST00000262291 RSRP1Q9BUV0 290 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 PIGMQ9H3S5 423 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 TRAV14DV4A0A0A6YYC5 116 aa11.66□□□□□ -0.54
VMP1-201ENST00000262291 A0A1B0GV90 55 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms