RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CEACAM21Q3KPI0 293 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 IZUMO1Q8IYV9 350 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 CCDC54Q8NEL0 328 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 BEST4Q8NFU0 473 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 HPSE2Q8WWQ2 592 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 C1orf159Q96HA4 380 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 DERL3Q96Q80 235 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 ZNF665Q9H7R5 613 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 HEXA-AS1Q9H8Q6 139 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 H3BSH0 61 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 NRASP01111 189 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 ISG15P05161 165 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 TMEM155Q4W5P6 130 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 HES5Q5TA89 166 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 METTL11BQ5VVY1 283 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 ZNF826PQ6ZT77 177 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 MOB3CQ70IA8 216 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 C11orf53Q8IXP5 236 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 FCAMRQ8WWV6 532 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 HRASLSQ9HDD0 168 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 YAE1D1Q9NRH1 226 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 V9GY05 133 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 ABCA1O95477 2261 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 PPIAL4EA0A075B759 164 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 LOC107986453A0A1B0GWG9 222 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 TMEM210A6NLX4 147 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 PPIAL4DF5H284 164 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 ZNF205O95201 554 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 FSTL3O95633 263 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 IGHV2-5P01817 119 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 PPIAL4FP0DN26 164 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 M6PRP20645 277 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 MDH2P40926 338 aaKnown RBP14.06□□□□□ -0.16
SDCBP-201ENST00000260130 LGALSLQ3ZCW2 172 aaPredicted RBP14.06□□□□□ -0.16
SDCBP-201ENST00000260130 FAM76BQ5HYJ3 339 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 FAM201AQ5SY85 155 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 CLVS2Q5SYC1 327 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 TMEM42Q69YG0 159 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 SPICQ8N5J4 248 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 LINC01356Q8N9X3 169 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 OR5A2Q8NGI9 324 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 C15orf40Q8WUR7 153 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 RAB40AQ8WXH6 277 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 RAB39BQ96DA2 213 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 S100A16Q96FQ6 103 aaKnown RBP14.06□□□□□ -0.16
SDCBP-201ENST00000260130 FGF23Q9GZV9 251 aaPredicted RBP14.06□□□□□ -0.16
SDCBP-201ENST00000260130 SLITRK2Q9H156 845 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 PPIAL4AQ9Y536 164 aa14.06□□□□□ -0.16
SDCBP-201ENST00000260130 OR4C45A6NMZ5 311 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 PIN1P1O15428 100 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 TGFAP01135 160 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 CALCBP10092 127 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 ZNF16P17020 682 aaPredicted RBP14.05□□□□□ -0.16
SDCBP-201ENST00000260130 TOR2AQ5JU69 321 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 PLCXD3Q63HM9 321 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 SFRP4Q6FHJ7 346 aaPredicted RBP14.05□□□□□ -0.16
SDCBP-201ENST00000260130 MUC20Q8N307 709 aaPredicted RBP14.05□□□□□ -0.16
SDCBP-201ENST00000260130 DPCDQ9BVM2 203 aaPredicted RBP14.05□□□□□ -0.16
SDCBP-201ENST00000260130 TLNRD1Q9H1K6 362 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 UBQLN2Q9UHD9 624 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 PCDHB10Q9UN67 800 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 hCG_1807616A0A1W2PRN6 198 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 B4DSR2 109 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 FAM157AC9JC47 383 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 CDIPTO14735 213 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 SNAPC5O75971 98 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 C4BPBP20851 252 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 MAPK3P27361 379 aaPredicted RBP14.05□□□□□ -0.16
SDCBP-201ENST00000260130 GPM6AP51674 278 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 GNG3P63215 75 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 DMRTC1Q5HYR2 192 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 OR2T35Q8NGX2 323 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 OR52I2Q8NH67 350 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 SLC25A38Q96DW6 304 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 GFI1Q99684 422 aa14.05□□□□□ -0.16
SDCBP-201ENST00000260130 ZNF732B4DXR9 585 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 ZP1P60852 638 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 CLLU1Q5K131 121 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 FAM166AQ6J272 317 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 ZNF676Q8N7Q3 588 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 C10orf35Q96D05 121 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 METTL17Q9H7H0 456 aaPredicted RBP14.04□□□□□ -0.16
SDCBP-201ENST00000260130 LIN7BQ9HAP6 207 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 BEX1Q9HBH7 125 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 GPR173Q9NS66 373 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 ZFHX3Q15911 3703 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 YLPM1P49750 1951 aaKnown RBP14.04□□□□□ -0.16
SDCBP-201ENST00000260130 HIVEP2P31629 2446 aa14.04□□□□□ -0.16
SDCBP-201ENST00000260130 NIPBLQ6KC79 2804 aaeCLIP14.04□□□□□ -0.16
SDCBP-201ENST00000260130 OR5B21A6NL26 309 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 LMX1BO60663 402 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 LHBP01229 141 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 RAB14P61106 215 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 TMEM69Q5SWH9 247 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 OLFML2AQ68BL7 652 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 WDR82Q6UXN9 313 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 NLRC3Q7RTR2 1065 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 GCSAMQ8N6F7 178 aa14.03□□□□□ -0.16
SDCBP-201ENST00000260130 BOLLQ8N9W6 283 aaKnown RBP14.03□□□□□ -0.16
SDCBP-201ENST00000260130 PATZ1Q9HBE1 687 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms