RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 HDAC8Q9BY41 377 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 TIMM9Q9Y5J7 89 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 ARID1AO14497 2285 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 IFITM10A6NMD0 228 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 CDKN2AP42771 156 aaKnown RBP9.1□□□□□ -0.95
TRPM1-201ENST00000256552 FAM3AP98173 230 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 MYPOPQ86VE0 399 aaPredicted RBP9.1□□□□□ -0.95
TRPM1-201ENST00000256552 ZNF385AQ96PM9 386 aaKnown RBP9.1□□□□□ -0.95
TRPM1-201ENST00000256552 WDR13Q9H1Z4 485 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 TXNIPQ9H3M7 391 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 ZNF355PQ9NSJ1 428 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 DSPPQ9NZW4 1301 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 CLEC18AA5D8T8 446 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 LRRC3CA6NJW4 275 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 GCM2O75603 506 aaPredicted RBP9.1□□□□□ -0.95
TRPM1-201ENST00000256552 IGFBP4P22692 258 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 CSRP3P50461 194 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 AESQ08117 197 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 LTC4SQ16873 150 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 MORN1Q5T089 497 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 CDC20BQ86Y33 519 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 CLEC18CQ8NCF0 446 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 ORAOV1Q8WV07 137 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 MRPL24Q96A35 216 aaKnown RBP9.1□□□□□ -0.95
TRPM1-201ENST00000256552 EID2BQ96D98 161 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 MEGF9Q9H1U4 602 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 OR2D2Q9H210 308 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 ZNF107Q9UII5 783 aaPredicted RBP9.1□□□□□ -0.95
TRPM1-201ENST00000256552 ARAP2Q8WZ64 1704 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 USP54Q70EL1 1684 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 A0A087WUJ7 227 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 SHISA3A0PJX4 238 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 DUX1O43812 170 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 C1QL1O75973 258 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 GYPAP02724 150 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 UBE2V1Q13404 147 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 HEPN1Q6WQI6 88 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 C16orf82Q7Z2V1 217 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 GJC3Q8NFK1 279 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 ZNF48Q96MX3 618 aaPredicted RBP9.1□□□□□ -0.95
TRPM1-201ENST00000256552 VCX2Q9H322 139 aa9.1□□□□□ -0.95
TRPM1-201ENST00000256552 TMEM265A0A087WTH1 108 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 METTL12A8MUP2 240 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 SRSF9Q13242 221 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRPM1-201ENST00000256552 ZNF664Q8N3J9 261 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 FAM169BQ8N8A8 192 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 SLC25A38Q96DW6 304 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 SNHG12Q9BXW3 62 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 ZNF835Q9Y2P0 537 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 DLEC1Q9Y238 1755 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 TRPM3Q9HCF6 1732 aaPredicted RBP9.09□□□□□ -0.95
TRPM1-201ENST00000256552 NEURL1O76050 574 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 CD8AP01732 235 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 BTCP35070 178 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 LIMS1P48059 325 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 OR10W1Q8NGF6 305 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 UTP23Q9BRU9 249 aaKnown RBP9.09□□□□□ -0.95
TRPM1-201ENST00000256552 ZBP1Q9H171 429 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 KLK13Q9UKR3 277 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 NKX6-3A6NJ46 265 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 H0YL77 283 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 TMEM116Q8NCL8 245 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 OR10AC1Q8NH08 325 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 HSPB9Q9BQS6 159 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 SLC25A22Q9H936 323 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 PRKNO60260 465 aaPredicted RBP9.09□□□□□ -0.95
TRPM1-201ENST00000256552 CDC14BO60729 498 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 RPS23P62266 143 aaKnown RBP9.09□□□□□ -0.95
TRPM1-201ENST00000256552 SRSF3P84103 164 aaKnown RBP9.09□□□□□ -0.95
TRPM1-201ENST00000256552 TRA2AQ13595 282 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRPM1-201ENST00000256552 C1orf194Q5T5A4 169 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 TAAR6Q96RI8 345 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 PECRQ9BY49 303 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 CACNA1CQ13936 2221 aa9.09□□□□□ -0.95
TRPM1-201ENST00000256552 A0A087WWC5 75 aa9.09□□□□□ -0.96
TRPM1-201ENST00000256552 HS3ST1O14792 307 aa9.09□□□□□ -0.96
TRPM1-201ENST00000256552 FGF16O43320 207 aa9.09□□□□□ -0.96
TRPM1-201ENST00000256552 COX7A2P2O60397 106 aa9.09□□□□□ -0.96
TRPM1-201ENST00000256552 ERHP84090 104 aaKnown RBP9.09□□□□□ -0.96
TRPM1-201ENST00000256552 RTL8BQ17RB0 113 aa9.09□□□□□ -0.96
TRPM1-201ENST00000256552 SMIM21Q3B7S5 101 aa9.09□□□□□ -0.96
TRPM1-201ENST00000256552 ZNF793Q6ZN11 406 aa9.09□□□□□ -0.96
TRPM1-201ENST00000256552 RFLNBQ8N5W9 214 aa9.09□□□□□ -0.96
TRPM1-201ENST00000256552 MED29Q9NX70 200 aa9.09□□□□□ -0.96
TRPM1-201ENST00000256552 TMEM238C9JI98 176 aa9.08□□□□□ -0.96
TRPM1-201ENST00000256552 NUDT3O95989 172 aa9.08□□□□□ -0.96
TRPM1-201ENST00000256552 F11P03951 625 aa9.08□□□□□ -0.96
TRPM1-201ENST00000256552 GAPDHP04406 335 aaKnown RBP9.08□□□□□ -0.96
TRPM1-201ENST00000256552 GNG4P50150 75 aa9.08□□□□□ -0.96
TRPM1-201ENST00000256552 FDX2Q6P4F2 183 aa9.08□□□□□ -0.96
TRPM1-201ENST00000256552 RAB37Q96AX2 223 aa9.08□□□□□ -0.96
TRPM1-201ENST00000256552 NEIL1Q96FI4 390 aaPredicted RBP9.08□□□□□ -0.96
TRPM1-201ENST00000256552 SOX21Q9Y651 276 aaPredicted RBP9.08□□□□□ -0.96
TRPM1-201ENST00000256552 TOGARAM1Q9Y4F4 1720 aa9.08□□□□□ -0.96
TRPM1-201ENST00000256552 PCM1Q15154 2024 aa9.08□□□□□ -0.96
TRPM1-201ENST00000256552 IGHV2-5P01817 119 aa9.08□□□□□ -0.96
TRPM1-201ENST00000256552 ZNF121P58317 390 aaPredicted RBP9.08□□□□□ -0.96
TRPM1-201ENST00000256552 EWSR1Q01844 656 aaKnown RBP eCLIP9.08□□□□□ -0.96
TRPM1-201ENST00000256552 SRYQ05066 204 aa9.08□□□□□ -0.96
TRPM1-201ENST00000256552 IL24Q13007 206 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms