RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ZNF146Q15072 292 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 SMIM21Q3B7S5 101 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 TMEM200BQ69YZ2 307 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 BTNL3Q6UXE8 466 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 BRD3OSQ6XYD6 125 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 TMEM106AQ96A25 262 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 DMRTB1Q96MA1 342 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 COMMD4Q9H0A8 199 aa11.26□□□□□ -0.61
VEGFA-201ENST00000230480 SF3B6Q9Y3B4 125 aaKnown RBP11.26□□□□□ -0.61
VEGFA-201ENST00000230480 TRAV40A0A0B4J280 105 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 GPR37O15354 613 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 TK1P04183 234 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 ALDOBP05062 364 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 GSTT2P0CG29 244 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 GSTT2BP0CG30 244 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 CD37P11049 281 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 CELP19835 753 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 LMO1P25800 156 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 ZNF273Q14593 569 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 LRRC10Q5BKY1 277 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 FAM27D1Q5T7N8 215 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 THOC7Q6I9Y2 204 aaKnown RBP11.25□□□□□ -0.61
VEGFA-201ENST00000230480 USP43Q70EL4 1123 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 SAXO1Q8IYX7 474 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 FAM58AQ8N1B3 248 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 PNKDQ8N490 385 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 ZNF561Q8N587 486 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 SIGLECL1Q8N7X8 197 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 OR4S1Q8NGB4 309 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 OR5D14Q8NGL3 314 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 DERL3Q96Q80 235 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 OR14A2Q96R54 314 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 PCGF1Q9BSM1 259 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 MRI1Q9BV20 369 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 UNKLQ9H9P5 680 aaKnown RBP11.25□□□□□ -0.61
VEGFA-201ENST00000230480 OR14J1Q9UGF5 321 aa11.25□□□□□ -0.61
VEGFA-201ENST00000230480 MEX3AA1L020 520 aaKnown RBP11.24□□□□□ -0.61
VEGFA-201ENST00000230480 MEGF11A6BM72 1044 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 TOX4O94842 621 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 NDUFB7P17568 137 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 OR3A1P47881 315 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 OR3A4PP47883 348 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 BDH1Q02338 343 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 TPBGQ13641 420 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 PDCD1Q15116 288 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 SPHARQ15513 63 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 Q499Y3 187 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 YIF1BQ5BJH7 314 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 ELP2Q6IA86 826 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 TMEM91Q6ZNR0 172 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 VMO1Q7Z5L0 202 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 MKXQ8IYA7 352 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 PNLDC1Q8NA58 520 aaKnown RBP11.24□□□□□ -0.61
VEGFA-201ENST00000230480 TMEM185AQ8NFB2 350 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 OR4M1Q8NGD0 313 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 TSEN15Q8WW01 171 aaKnown RBP11.24□□□□□ -0.61
VEGFA-201ENST00000230480 TAF15Q92804 592 aaKnown RBP eCLIP11.24□□□□□ -0.61
VEGFA-201ENST00000230480 DAPK2Q9UIK4 370 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 KPTNQ9Y664 436 aa11.24□□□□□ -0.61
VEGFA-201ENST00000230480 A0A1W2PP11 408 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 TCF21O43680 179 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 CDRT1O95170 752 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 HAND1O96004 215 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 CCL3L1P16619 93 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 FSTP19883 344 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 RAB3AP20336 220 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 KLRD1Q13241 179 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 DEFB112Q30KQ8 113 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 ARMCX4Q5H9R4 360 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 LDLRAD2Q5SZI1 272 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 UTF1Q5T230 341 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 METAP1DQ6UB28 335 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-201ENST00000230480 C1orf122Q6ZSJ8 110 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 KIR3DL3Q8N743 410 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-201ENST00000230480 ZSCAN4Q8NAM6 433 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-201ENST00000230480 PXT1Q8NFP0 134 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 OR10K1Q8NGX5 313 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 H1FXQ92522 213 aaKnown RBP11.23□□□□□ -0.61
VEGFA-201ENST00000230480 EMG1Q92979 244 aaKnown RBP11.23□□□□□ -0.61
VEGFA-201ENST00000230480 MYDGFQ969H8 173 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 GFI1Q99684 422 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 FAM234AQ9H0X4 552 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 AKIP1Q9NQ31 210 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 SIRT7Q9NRC8 400 aa11.23□□□□□ -0.61
VEGFA-201ENST00000230480 A0A0A6YYJ9 748 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 IGHV1-69DA0A0B4J2H0 117 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 A0A0G2JK05 382 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 MYL12BO14950 172 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 SLC22A1O15245 554 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 OR2H2O95918 312 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 IGHV1-69P01742 117 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 CHRM2P08172 466 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 PRKACAP17612 351 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 TGFBR2P37173 567 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 SERPINB10P48595 397 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 SNU13P55769 128 aaKnown RBP11.22□□□□□ -0.61
VEGFA-201ENST00000230480 SSX1Q16384 188 aa11.22□□□□□ -0.61
VEGFA-201ENST00000230480 PRSS48Q7RTY5 328 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms