RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 GLP1RP43220 463 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 RAB5BP61020 215 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 PCBD1P61457 104 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 IL13RA2Q14627 380 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 DAZAP2Q15038 168 aaPredicted RBP14.06□□□□□ -0.16
LTBR-201ENST00000228918 FBXW12Q6X9E4 464 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.06□□□□□ -0.16
LTBR-201ENST00000228918 SLC39A7Q92504 469 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 PIGCQ92535 297 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 AKR1E2Q96JD6 320 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 TECTBQ96PL2 329 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 RSRP1Q9BUV0 290 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 SEBOXQ9HB31 216 aaPredicted RBP14.06□□□□□ -0.16
LTBR-201ENST00000228918 GPR35Q9HC97 309 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 KPTNQ9Y664 436 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 UBE2CO00762 179 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 TSPAN15O95858 294 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 AADACP22760 399 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 CLDN15P56746 228 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 PDCD1Q15116 288 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 PEA15Q15121 130 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 MIDNQ504T8 468 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 CCDC71LQ8N9Z2 235 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 SECTM1Q8WVN6 248 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 BCL2L14Q9BZR8 327 aa14.06□□□□□ -0.16
LTBR-201ENST00000228918 ZNF587BE7ETH6 402 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 PHF1O43189 567 aaPredicted RBP14.05□□□□□ -0.16
LTBR-201ENST00000228918 MMP7P09237 267 aaPredicted RBP14.05□□□□□ -0.16
LTBR-201ENST00000228918 SNCAP37840 140 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 PMELP40967 661 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 UCP2P55851 309 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 HERV-K104P61576 105 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 Q0VFX4 171 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 WIPI1Q5MNZ9 446 aaPredicted RBP14.05□□□□□ -0.16
LTBR-201ENST00000228918 TMEM211Q6ICI0 200 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 PPP1R32Q7Z5V6 425 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 CALHM1Q8IU99 346 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 COMMD1Q8N668 190 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 HPSE2Q8WWQ2 592 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 EGLN1Q9GZT9 426 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 OR51M1Q9H341 326 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 NIT2Q9NQR4 276 aa14.05□□□□□ -0.16
LTBR-201ENST00000228918 NME2P1O60361 137 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 PAX6P26367 422 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 HOXA6P31267 233 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 PPT1P50897 306 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 HMGN3Q15651 99 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 TRIM61Q5EBN2 209 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 ZNF611Q8N823 705 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 SPSB4Q96A44 273 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 SCRT1Q9BWW7 348 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 ZNF442Q9H7R0 627 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 SMCO4Q9NRQ5 59 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 LUZP4Q9P127 313 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 ST8SIA3O43173 380 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 GATCO43716 136 aaKnown RBP14.04□□□□□ -0.16
LTBR-201ENST00000228918 PPYP01298 95 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 IGHEP01854 428 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 FUT3P21217 361 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 RPS18P62269 152 aaKnown RBP14.04□□□□□ -0.16
LTBR-201ENST00000228918 SLC35G3Q8N808 338 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 OR4D5Q8NGN0 318 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 TP53RKQ96S44 253 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 C1QTNF5Q9BXJ0 243 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 PARPBPQ9NWS1 579 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 RCL1Q9Y2P8 373 aaKnown RBP14.04□□□□□ -0.16
LTBR-201ENST00000228918 TMED3Q9Y3Q3 217 aa14.04□□□□□ -0.16
LTBR-201ENST00000228918 TMEM265A0A087WTH1 108 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 PATE3B3GLJ2 98 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 CYTIPO60759 359 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 TRAPPC6AO75865 159 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 OR7C1O76099 320 aaPredicted RBP14.03□□□□□ -0.16
LTBR-201ENST00000228918 FOSL1P15407 271 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 S100PP25815 95 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 DUSP3P51452 185 aaPredicted RBP14.03□□□□□ -0.16
LTBR-201ENST00000228918 ZNF616Q08AN1 781 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 ETV3LQ6ZN32 361 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 MAFAQ8NHW3 353 aaPredicted RBP14.03□□□□□ -0.16
LTBR-201ENST00000228918 ABHD3Q8WU67 409 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 PRDM14Q9GZV8 571 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 DEPPQ9NTK1 212 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 RYDENQ9NUL5 291 aaKnown RBP14.03□□□□□ -0.16
LTBR-201ENST00000228918 PTAFRP25105 342 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 OTX2P32243 289 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 NPBWR2P48146 333 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 CAMLGP49069 296 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 GUK1Q16774 197 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 SLC25A26Q70HW3 274 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 WDR5BQ86VZ2 330 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 ZNF845Q96IR2 970 aaPredicted RBP14.03□□□□□ -0.16
LTBR-201ENST00000228918 SH3BGRL3Q9H299 93 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 P4HTMQ9NXG6 502 aa14.03□□□□□ -0.16
LTBR-201ENST00000228918 IGHV2-70P01814 119 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 LMO1P25800 156 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 FHITP49789 147 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 NHLH2Q02577 135 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 MEX3BQ6ZN04 569 aaKnown RBP14.02□□□□□ -0.16
LTBR-201ENST00000228918 BATF2Q8N1L9 274 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 C15orf54Q8N8G6 183 aa14.02□□□□□ -0.16
LTBR-201ENST00000228918 CPEB3Q8NE35 698 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms