RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 RCC1LQ96I51 464 aaKnown RBP13.4□□□□□ -0.26
VTN-201ENST00000226218 TGIF2Q9GZN2 237 aa13.4□□□□□ -0.26
VTN-201ENST00000226218 PLEKHF2Q9H8W4 249 aa13.4□□□□□ -0.26
VTN-201ENST00000226218 SEMA5BQ9P283 1151 aa13.4□□□□□ -0.26
VTN-201ENST00000226218 URGCP-MRPS24S4R325 110 aa13.4□□□□□ -0.26
VTN-201ENST00000226218 A0A1B0GV90 55 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 FAM230AA0A1W2PPH8 454 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 SHISA7A6NL88 538 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 M0R135 149 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 CYB5BO43169 146 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 IFNA10P01566 189 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 PNLIPP16233 465 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 EPHA1P21709 976 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 CLDN17P56750 224 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 DEFB133Q30KQ1 61 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 SNAI3Q3KNW1 292 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 C20orf196Q8IYI0 205 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 OR2M3Q8NG83 312 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 M1APQ8TC57 530 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 FRZBQ92765 325 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 ZNF799Q96GE5 643 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 ABHD14BQ96IU4 210 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 NIPSNAP3BQ9BS92 247 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 CD207Q9UJ71 328 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 PTRH2Q9Y3E5 179 aaKnown RBP13.39□□□□□ -0.27
VTN-201ENST00000226218 RTTNQ86VV8 2226 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 ST8SIA5O15466 376 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 TRGC1P0CF51 173 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 SELLP14151 372 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 AADACP22760 399 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 NKX2-1P43699 371 aaPredicted RBP13.39□□□□□ -0.27
VTN-201ENST00000226218 ARL4DP49703 201 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 PKIAP61925 76 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 RSU1Q15404 277 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 EXT1Q16394 746 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 UNQ6494/PRO21346Q6UXR6 183 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 ZNF501Q96CX3 271 aaPredicted RBP13.39□□□□□ -0.27
VTN-201ENST00000226218 RBMXL1Q96E39 390 aaKnown RBP13.39□□□□□ -0.27
VTN-201ENST00000226218 TMEM56Q96MV1 263 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 NKX2-4Q9H2Z4 354 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 ZNF286AQ9HBT8 521 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 TMEM56-RWDD3S4R434 201 aa13.39□□□□□ -0.27
VTN-201ENST00000226218 C3orf85A0A1B0GTC6 90 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 LOC102723971A0A1B0GUV8 181 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 A0A1W2PR77 199 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 CLEC18AA5D8T8 446 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 B4DEV8 164 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 HSPA12AO43301 675 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 ONECUT2O95948 504 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 RNF224P0DH78 156 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 OR1D5P58170 312 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 NKX6-1P78426 367 aaPredicted RBP13.38□□□□□ -0.27
VTN-201ENST00000226218 SRPXP78539 464 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 MEX3BQ6ZN04 569 aaKnown RBP13.38□□□□□ -0.27
VTN-201ENST00000226218 ZNF100Q8IYN0 542 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 CLEC18CQ8NCF0 446 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 OR5C1Q8NGR4 320 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 CPNE4Q96A23 557 aaPredicted RBP13.38□□□□□ -0.27
VTN-201ENST00000226218 ZNF700Q9H0M5 742 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 CALHM2Q9HA72 323 aa13.38□□□□□ -0.27
VTN-201ENST00000226218 IGLV3-12A0A075B6K2 115 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 IGHV1OR21-1A0A087WYE8 117 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 IGKV1-12A0A0C4DH73 117 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 TRBV11-1A0A0K0K1C0 115 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 FAM221AA4D161 298 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 GEMIN2O14893 280 aaKnown RBP13.37□□□□□ -0.27
VTN-201ENST00000226218 MPPED1O15442 326 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 IGKV1D-12P01611 117 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 CD63P08962 238 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 NR2C1P13056 603 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 DDTP30046 118 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 DYNLT3P51808 116 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 HLA-DRB3P79483 266 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 OR8B8Q15620 311 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 FAM90A2PQ658T7 463 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 OR2T2Q6IF00 324 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 DPPA3Q6W0C5 159 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 OR10G3Q8NGC4 313 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 GNPNAT1Q96EK6 184 aaPredicted RBP13.37□□□□□ -0.27
VTN-201ENST00000226218 SLC25A31Q9H0C2 315 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 GON4LQ3T8J9 2241 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 EML6Q6ZMW3 1958 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 TLX3O43711 291 aaPredicted RBP13.37□□□□□ -0.27
VTN-201ENST00000226218 TMEM50AO95807 157 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 CRYGSP22914 178 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 CEBPGP53567 150 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 H3F3AP84243 136 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 CHAF1BQ13112 559 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 PIGYQ3MUY2 71 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 Q3ZCU0 254 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 SSX9Q7RTT3 188 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 CPEB2Q7Z5Q1 589 aaKnown RBP13.37□□□□□ -0.27
VTN-201ENST00000226218 SIGLEC12Q96PQ1 595 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 MTIF3Q9H2K0 278 aaKnown RBP13.37□□□□□ -0.27
VTN-201ENST00000226218 PLSCR2Q9NRY7 297 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 TMEM242Q9NWH2 141 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 CLEC1BQ9P126 229 aa13.37□□□□□ -0.27
VTN-201ENST00000226218 SLC7A11Q9UPY5 501 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms