RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 SPNS3Q6ZMD2 512 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 Q6ZSR3 168 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 TMEM123Q8N131 208 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 ZIC4Q8N9L1 334 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 TMEM54Q969K7 222 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 PBDC1Q9BVG4 233 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 SUCNR1Q9BXA5 334 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 TOLLIPQ9H0E2 274 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 P4HTMQ9NXG6 502 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 STRAPQ9Y3F4 350 aaKnown RBP10.73□□□□□ -0.69
NUP88-201ENST00000225696 LIPGQ9Y5X9 500 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 HS3ST3B1Q9Y662 390 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 TGIF2-C20orf24A0A0A6YYL0 155 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 TERTO14746 1132 aaKnown RBP10.73□□□□□ -0.69
NUP88-201ENST00000225696 DHHO43323 396 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 TLX3O43711 291 aaPredicted RBP10.73□□□□□ -0.69
NUP88-201ENST00000225696 CST7O76096 145 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 LY86O95711 162 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 GLB1P16278 677 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 HOXA5P20719 270 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 IL13RA2Q14627 380 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 ARL6IP1Q15041 203 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 TSC22D1Q15714 1073 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 C10orf128Q5T292 105 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 ZNF468Q5VIY5 522 aaPredicted RBP10.73□□□□□ -0.69
NUP88-201ENST00000225696 OR2C3Q8N628 320 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 FADS6Q8N9I5 356 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 SMRP1Q8NCR6 262 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 SPACA9Q96E40 222 aaPredicted RBP10.73□□□□□ -0.69
NUP88-201ENST00000225696 DOK5Q9P104 306 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 MTCH2Q9Y6C9 303 aa10.73□□□□□ -0.69
NUP88-201ENST00000225696 LOC102725191A0A1B0GVB3 256 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 ZFAND5O76080 213 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 DTYMKP23919 212 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 RAB5CP51148 216 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 ELOBQ15370 118 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 SHBQ15464 509 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 RTL6Q6ICC9 239 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 C1QL4Q86Z23 238 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 LGI3Q8N145 548 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 TMEM217Q8N7C4 229 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 CYB561D1Q8N8Q1 229 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 OR5L2Q8NGL0 311 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 MOB3AQ96BX8 217 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 ANGPTL4Q9BY76 406 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 PRO3102Q9H379 93 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 ST3GAL6Q9Y274 331 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 SSSCA1O60232 199 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 IFNA17P01571 189 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 CRYGSP22914 178 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 GNRHRP30968 328 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 TAGLN2P37802 199 aaKnown RBP10.72□□□□□ -0.69
NUP88-201ENST00000225696 EIF3IQ13347 325 aaKnown RBP10.72□□□□□ -0.69
NUP88-201ENST00000225696 HIKESHIQ53FT3 197 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 PDZD11Q5EBL8 140 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 ZNF576Q9H609 170 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 PARPBPQ9NWS1 579 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 MUC3AQ02505 3323 aa10.72□□□□□ -0.69
NUP88-201ENST00000225696 C3orf85A0A1B0GTC6 90 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 A0A1B0GW64 132 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 SCRG1O75711 98 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 SRP19P09132 144 aaKnown RBP10.71□□□□□ -0.69
NUP88-201ENST00000225696 NPBWR2P48146 333 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 DLK1P80370 383 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 ICAM4Q14773 271 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 SP5Q6BEB4 398 aaPredicted RBP10.71□□□□□ -0.69
NUP88-201ENST00000225696 ZNF600Q6ZNG1 722 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 FOXL2NBQ6ZUU3 175 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 OR5C1Q8NGR4 320 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 NAT6Q93015 286 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 HS3ST6Q96QI5 342 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 ZNF700Q9H0M5 742 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 FOXD3Q9UJU5 478 aaPredicted RBP10.71□□□□□ -0.69
NUP88-201ENST00000225696 SLC7A11Q9UPY5 501 aa10.71□□□□□ -0.69
NUP88-201ENST00000225696 NPIPA2E9PIF3 369 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 NPIPA3F8WFD2 350 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 MPPED1O15442 326 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 LCATP04180 440 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 CDX1P47902 265 aaPredicted RBP10.7□□□□□ -0.7
NUP88-201ENST00000225696 RGS19P49795 217 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 RBP2P50120 134 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 AFF3P51826 1226 aaKnown RBP10.7□□□□□ -0.7
NUP88-201ENST00000225696 RAB2AP61019 212 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 RAB1AP62820 205 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 GNMTQ14749 295 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 COL19A1Q14993 1142 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 WDR74Q6RFH5 385 aaPredicted RBP10.7□□□□□ -0.7
NUP88-201ENST00000225696 P4HA3Q7Z4N8 544 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 CALHM1Q8IU99 346 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 OSR2Q8N2R0 312 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 ZNF383Q8NA42 475 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 FGFBP3Q8TAT2 258 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 SPTSSAQ969W0 71 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 SRXN1Q9BYN0 137 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 DEFB126Q9BYW3 111 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 ULBP2Q9BZM5 246 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 TNFSF11O14788 317 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 SYNGR3O43761 229 aa10.7□□□□□ -0.7
NUP88-201ENST00000225696 ZIC3O60481 467 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms