RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 MRI1Q9BV20 369 aa11.33□□□□□ -0.6
UPK1A-201ENST00000222275 SPACA1Q9HBV2 294 aa11.33□□□□□ -0.6
UPK1A-201ENST00000222275 OR5V1Q9UGF6 321 aa11.33□□□□□ -0.6
UPK1A-201ENST00000222275 STEAP1Q9UHE8 339 aa11.33□□□□□ -0.6
UPK1A-201ENST00000222275 ZNF222Q9UK12 451 aa11.33□□□□□ -0.6
UPK1A-201ENST00000222275 POLR3KQ9Y2Y1 108 aaPredicted RBP11.33□□□□□ -0.6
UPK1A-201ENST00000222275 TRRAPQ9Y4A5 3859 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 IGKV1D-17A0A075B6S4 117 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 TRAV20A0A0B4J274 112 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A10PA6NDY2 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A18PA6NE21 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A16PA6NEW6 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A20PA6NIJ5 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A8PA6NJQ4 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A7PA6NKC0 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 IFITM5A6NNB3 132 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A22PA8MWA6 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A12PA8MX19 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A5PA8MXJ8 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A23PA8MXZ1 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 F8VVB4 439 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 F8VWA3 439 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 AIPO00170 330 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 NOL3O60936 208 aaKnown RBP11.32□□□□□ -0.6
UPK1A-201ENST00000222275 HAND1O96004 215 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 MSMBP08118 114 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A15PP0C7V4 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A13PP0C7W8 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A14PP0C7W9 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FAM90A24PP0C7X0 464 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 ARSBP15848 533 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 SERPINA2P20848 420 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 SDC2P34741 201 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 CAV3P56539 151 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 MPV17LQ2QL34 196 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 WDR25Q64LD2 544 aaPredicted RBP11.32□□□□□ -0.6
UPK1A-201ENST00000222275 LYPD2Q6UXB3 125 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 OR2W3Q7Z3T1 314 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 GLCCI1Q86VQ1 547 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 TMEM158Q8WZ71 300 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 SEH1LQ96EE3 360 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 SNX22Q96L94 193 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 GAFA1Q96PS6 74 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 SLC25A10Q9UBX3 287 aaPredicted RBP11.32□□□□□ -0.6
UPK1A-201ENST00000222275 ST3GAL6Q9Y274 331 aa11.32□□□□□ -0.6
UPK1A-201ENST00000222275 FUOMA2VDF0 154 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 DVL1O14640 695 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 DEGS1O15121 323 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 CRTAPO75718 401 aaPredicted RBP11.31□□□□□ -0.6
UPK1A-201ENST00000222275 GABARAPO95166 117 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 IL1AP01583 271 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 LIPFP07098 398 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 ZNF44P15621 663 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 LMO1P25800 156 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 TMBIM6P55061 237 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 SCAND1P57086 179 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 HOXA4Q00056 320 aaPredicted RBP11.31□□□□□ -0.6
UPK1A-201ENST00000222275 GPR107Q5VW38 600 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 ZNF841Q6ZN19 808 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 BATF2Q8N1L9 274 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 TEX29Q8N6K0 151 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 FAM216BQ8N7L0 139 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 TMEM185AQ8NFB2 350 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 RAB2BQ8WUD1 216 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 URM1Q9BTM9 101 aaKnown RBP11.31□□□□□ -0.6
UPK1A-201ENST00000222275 C19orf24Q9BVV8 132 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 TMPRSS13Q9BYE2 586 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 IFT22Q9H7X7 185 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 FBLN5Q9UBX5 448 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 OPN4Q9UHM6 478 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 MAB21L2Q9Y586 359 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 DOCK11Q5JSL3 2073 aa11.31□□□□□ -0.6
UPK1A-201ENST00000222275 LOC105371242A0A075B767 164 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 TRBV23-1A0A0A0MS06 115 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 A0A1W2PPH5 198 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 SHISA3A0PJX4 238 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 K7N7A8 449 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 VENTXO95231 258 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 MGMTP16455 207 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 AMY2BP19961 511 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 KCNJ3P48549 501 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 RBM11P57052 281 aaKnown RBP11.3□□□□□ -0.6
UPK1A-201ENST00000222275 SEC61A1P61619 476 aaKnown RBP11.3□□□□□ -0.6
UPK1A-201ENST00000222275 LSM3P62310 102 aaKnown RBP11.3□□□□□ -0.6
UPK1A-201ENST00000222275 COL10A1Q03692 680 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 IKZF1Q13422 519 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 FAHD2BQ6P2I3 314 aaPredicted RBP11.3□□□□□ -0.6
UPK1A-201ENST00000222275 BTNL3Q6UXE8 466 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 CD177Q8N6Q3 437 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 ASCC1Q8N9N2 400 aaKnown RBP11.3□□□□□ -0.6
UPK1A-201ENST00000222275 OR10K1Q8NGX5 313 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 ST8SIA4Q92187 359 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 PTX4Q96A99 478 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 FAM3DQ96BQ1 224 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 FAHD2AQ96GK7 314 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 GFI1Q99684 422 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 TMEM59Q9BXS4 323 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 MMP26Q9NRE1 261 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 CTSZQ9UBR2 303 aa11.3□□□□□ -0.6
UPK1A-201ENST00000222275 A0A0G2JMP0 313 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms