RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 CDC34P49427 236 aaPredicted RBP8.64□□□□□ -1.03
USP11-201ENST00000218348 RAG2P55895 527 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 GFRA1P56159 465 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 IL13RA1P78552 427 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 GAMTQ14353 236 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 PIGYQ3MUY2 71 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 RNFT1Q5M7Z0 435 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 MCEMP1Q8IX19 187 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 KCNE4Q8WWG9 221 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 TCEAL7Q9BRU2 100 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 SLC17A5Q9NRA2 495 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 PLEKHJ1Q9NW61 149 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 ABI3Q9P2A4 366 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 IGKV1D-8A0A087WSZ0 117 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 LOC102725191A0A1B0GVB3 256 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 C5orf51A6NDU8 294 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 EREGO14944 169 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 SPDEFO95238 335 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 SYNGR4O95473 234 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 PGAM2P15259 253 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 ID4P47928 161 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 RSU1Q15404 277 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 RAB12Q6IQ22 244 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 NUFIP2Q7Z417 695 aaKnown RBP8.64□□□□□ -1.03
USP11-201ENST00000218348 ZNF100Q8IYN0 542 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 TCTEX1D2Q8WW35 142 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 MRGPRFQ96AM1 343 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 ADGRG7Q96K78 797 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 TREM1Q9NP99 234 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 ACKR4Q9NPB9 350 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 CRIM1Q9NZV1 1036 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 B4GALT7Q9UBV7 327 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 IGKV1-27A0A075B6S5 117 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 C21orf140B9A014 251 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 SYNGR3O43761 229 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 NGFP01138 241 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 SERPINA5P05154 406 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 LHX2P50458 406 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 SCAND1P57086 179 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 IKZF1Q13422 519 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 KCNMB1Q16558 191 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 HIKESHIQ53FT3 197 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 PLCXD3Q63HM9 321 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 RNASE8Q8TDE3 154 aaKnown RBP8.64□□□□□ -1.03
USP11-201ENST00000218348 URM1Q9BTM9 101 aaKnown RBP8.64□□□□□ -1.03
USP11-201ENST00000218348 OR2H1Q9GZK4 316 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 OPA3Q9H6K4 179 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 EHFQ9NZC4 300 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 OPN4Q9UHM6 478 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 PRSS50Q9UI38 385 aa8.64□□□□□ -1.03
USP11-201ENST00000218348 ZNF850A8MQ14 1090 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 HSBP1L1C9JCN9 74 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 CYTIPO60759 359 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 ZNF44P15621 663 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 RPS2P15880 293 aaKnown RBP8.63□□□□□ -1.03
USP11-201ENST00000218348 NFYAP23511 347 aaPredicted RBP8.63□□□□□ -1.03
USP11-201ENST00000218348 GSK3AP49840 483 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 DNM1P46Q6ZS02 220 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 OR5M9Q8NGP3 310 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 BORCS8Q96FH0 119 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 SLCO5A1Q9H2Y9 848 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 PRDM13Q9H4Q3 707 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 FN3KRPQ9HA64 309 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 C19orf12Q9NSK7 152 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 TP53TG5Q9Y2B4 290 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 TPRP12270 2363 aaKnown RBP8.63□□□□□ -1.03
USP11-201ENST00000218348 OR14I1A6ND48 311 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 NXPH2O95156 264 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 FARS2O95363 451 aaKnown RBP8.63□□□□□ -1.03
USP11-201ENST00000218348 HPNP05981 417 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 PPP3CBP16298 524 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 RBM39Q14498 530 aaKnown RBP8.63□□□□□ -1.03
USP11-201ENST00000218348 H3F3CQ6NXT2 135 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 WFDC12Q8WWY7 111 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 TMEM208Q9BTX3 173 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 TOLLIPQ9H0E2 274 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 TIMM10BQ9Y5J6 103 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 MED12LQ86YW9 2145 aa8.63□□□□□ -1.03
USP11-201ENST00000218348 ADAP1O75689 374 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 YIF1AO95070 293 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 ZNF14P17017 642 aaPredicted RBP8.62□□□□□ -1.03
USP11-201ENST00000218348 RAB6AP20340 208 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 GLRA1P23415 457 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 CLDN18P56856 261 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 FXYD4P59646 89 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 RAB35Q15286 201 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 LPCAT3Q6P1A2 487 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 CRIP3Q6Q6R5 217 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 TMEM17Q86X19 198 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 OR5H2Q8NGV7 314 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 TOMM40LQ969M1 308 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 GPR87Q9BY21 358 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 CHST5Q9GZS9 411 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 MCTS1Q9ULC4 181 aaKnown RBP8.62□□□□□ -1.03
USP11-201ENST00000218348 MED19A0JLT2 244 aaPredicted RBP8.62□□□□□ -1.03
USP11-201ENST00000218348 GEMIN2O14893 280 aaKnown RBP8.62□□□□□ -1.03
USP11-201ENST00000218348 NRASP01111 189 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 IL5P05113 134 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 SP1P08047 785 aa8.62□□□□□ -1.03
USP11-201ENST00000218348 GSTP1P09211 210 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms